RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TMEM230Q96A57 120 aa24.22■■□□□ 1.47
CSNK1E-206ENST00000413574 SCGB3A2Q96PL1 93 aa24.22■■□□□ 1.47
CSNK1E-206ENST00000413574 TP53RKQ96S44 253 aa24.22■■□□□ 1.47
CSNK1E-206ENST00000413574 SPDEFO95238 335 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 LPAR6P43657 344 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 SP6Q3SY56 376 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 LIN54Q6MZP7 749 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 CD300LFQ8TDQ1 290 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 SLC25A21Q9BQT8 299 aaPredicted RBP24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 HPRT1P00492 218 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 CRYGBP07316 175 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 RBMS2Q15434 407 aaKnown RBP24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 SSX9Q7RTT3 188 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 TMED4Q7Z7H5 227 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 SERTAD4Q9NUC0 356 aa24.21■■□□□ 1.47
CSNK1E-206ENST00000413574 C3orf85A0A1B0GTC6 90 aa24.2■■□□□ 1.46
CSNK1E-206ENST00000413574 SAA1P0DJI8 122 aaPredicted RBP24.2■■□□□ 1.46
CSNK1E-206ENST00000413574 RPA2P15927 270 aa24.2■■□□□ 1.46
CSNK1E-206ENST00000413574 AKR1C4P17516 323 aa24.2■■□□□ 1.46
CSNK1E-206ENST00000413574 PJVKQ0ZLH3 352 aa24.2■■□□□ 1.46
CSNK1E-206ENST00000413574 FOXL1Q12952 345 aa24.2■■□□□ 1.46
CSNK1E-206ENST00000413574 BEX1Q9HBH7 125 aa24.2■■□□□ 1.46
CSNK1E-206ENST00000413574 NDUFB6O95139 128 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 UBE2KP61086 200 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 AWAT1Q58HT5 328 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 RHOVQ96L33 236 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 TSC22D3Q99576 134 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 NAA60Q9H7X0 242 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 PLEKHA2Q9HB19 425 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 FLVCR2Q9UPI3 526 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 RNF114Q9Y508 228 aa24.19■■□□□ 1.46
CSNK1E-206ENST00000413574 TEX13DA0A0J9YY54 714 aaPredicted RBP24.18■■□□□ 1.46
CSNK1E-206ENST00000413574 CLPSL1A2RUU4 121 aa24.18■■□□□ 1.46
CSNK1E-206ENST00000413574 CRYM-AS1A6NIL9 109 aa24.18■■□□□ 1.46
CSNK1E-206ENST00000413574 IGHG2P01859 326 aa24.18■■□□□ 1.46
CSNK1E-206ENST00000413574 HLA-DRB1P01911 266 aa24.18■■□□□ 1.46
CSNK1E-206ENST00000413574 VMA21Q3ZAQ7 101 aa24.18■■□□□ 1.46
CSNK1E-206ENST00000413574 TCTEX1D1Q8N7M0 179 aa24.18■■□□□ 1.46
CSNK1E-206ENST00000413574 LINC00527Q9UJ94 153 aa24.18■■□□□ 1.46
CSNK1E-206ENST00000413574 H0Y980 276 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 VDAC2P45880 294 aaPredicted RBP24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 ASAH1Q13510 395 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 MRGPRG-AS1Q2M3A8 158 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 PPP1R27Q86WC6 154 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 TNCP24821 2201 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 IGHV7-81A0A0B4J1V7 117 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 HAX1O00165 279 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 HRASP01112 189 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 IGKV1-39P01597 117 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 IGKV1D-39P04432 117 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 OR5AC1P0C628 307 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 TAS2R31P59538 309 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 SLC35E3Q7Z769 313 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 TEX45Q8NA69 505 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 R3HDM4Q96D70 268 aa24.17■■□□□ 1.46
CSNK1E-206ENST00000413574 CA2P00918 260 aa24.16■■□□□ 1.46
CSNK1E-206ENST00000413574 NQO2P16083 231 aa24.16■■□□□ 1.46
CSNK1E-206ENST00000413574 KRTAP21-3Q3LHN1 58 aa24.16■■□□□ 1.46
CSNK1E-206ENST00000413574 NOL4LQ96MY1 436 aaPredicted RBP24.16■■□□□ 1.46
CSNK1E-206ENST00000413574 KRASP01116 189 aa24.15■■□□□ 1.46
CSNK1E-206ENST00000413574 SERPINE2P07093 398 aa24.15■■□□□ 1.46
CSNK1E-206ENST00000413574 COMMD9Q9P000 198 aa24.15■■□□□ 1.46
CSNK1E-206ENST00000413574 MMP24Q9Y5R2 645 aa24.15■■□□□ 1.46
CSNK1E-206ENST00000413574 SLC6A1P30531 599 aa24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 G6PCP35575 357 aa24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 SUPT4H1P63272 117 aaKnown RBP24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 CX3CL1P78423 397 aa24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 NDPQ00604 133 aa24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 OR4A47Q6IF82 309 aa24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 SGPP2Q8IWX5 399 aa24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 PUSL1Q8N0Z8 303 aaKnown RBP24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 DMBX1Q8NFW5 382 aa24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 FAM212BQ9NTI7 297 aaPredicted RBP24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 PRR13Q9NZ81 148 aa24.14■■□□□ 1.46
CSNK1E-206ENST00000413574 OR2A4O95047 310 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 PROK1P58294 105 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 GNB1P62873 340 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 SSBP2P81877 361 aaPredicted RBP24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 CENPSQ8N2Z9 138 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 GLYATL2Q8WU03 294 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 OR2A7Q96R45 310 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 ZNF430Q9H8G1 570 aaPredicted RBP24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 MARCH11A6NNE9 402 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 COMPP49747 757 aaPredicted RBP24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 PRSS8Q16651 343 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 STAB1Q9NY15 2570 aa24.13■■□□□ 1.45
CSNK1E-206ENST00000413574 ARPC1BO15143 372 aaKnown RBP24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 KBTBD11O94819 623 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 UCP1P25874 307 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 POU2AF1Q16633 256 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 MZT2BQ6NZ67 158 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 TMEM222Q9H0R3 208 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 OR51J1Q9H342 316 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 PARP11Q9NR21 331 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 TMEM140Q9NV12 185 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 FBXO7Q9Y3I1 522 aa24.12■■□□□ 1.45
CSNK1E-206ENST00000413574 TRAV3A0A0B4J244 114 aa24.11■■□□□ 1.45
CSNK1E-206ENST00000413574 A0A1B0GUS0 222 aa24.11■■□□□ 1.45
CSNK1E-206ENST00000413574 ATP6V0E1O15342 81 aa24.11■■□□□ 1.45
CSNK1E-206ENST00000413574 KCNAB3O43448 404 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms