RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 VKORC1L1Q8N0U8 176 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 FAM71E2Q8N5Q1 922 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 LINC01356Q8N9X3 169 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 DMBX1Q8NFW5 382 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 OSR1Q8TAX0 266 aaPredicted RBP5.37□□□□□ -1.55
VPS41-204ENST00000413141 DCUN1D4Q92564 292 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 LHX4Q969G2 390 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 RBMXL1Q96E39 390 aaKnown RBP5.37□□□□□ -1.55
VPS41-204ENST00000413141 HARBI1Q96MB7 349 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 RNF126Q9BV68 326 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 REG4Q9BYZ8 158 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 PLSCR3Q9NRY6 295 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 ZFP57Q9NU63 452 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 OR5AC2Q9NZP5 309 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 DPM3Q9P2X0 92 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 TNFSF18Q9UNG2 199 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 TBL2Q9Y4P3 447 aaKnown RBP5.37□□□□□ -1.55
VPS41-204ENST00000413141 LSM5Q9Y4Y9 91 aaKnown RBP5.37□□□□□ -1.55
VPS41-204ENST00000413141 HSPB11Q9Y547 144 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 MINOS1-NBL1R4GNA1 71 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 IGHV3-72A0A0B4J1Y9 119 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 TRAV40A0A0B4J280 105 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 CENPVL3A0A0U1RRI6 287 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 RNF222A6NCQ9 220 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 C15orf61A6NNL5 157 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 SRRM4A7MD48 611 aaKnown RBP5.36□□□□□ -1.55
VPS41-204ENST00000413141 OOSP1A8MZH6 123 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 FAM90A26D6RGX4 464 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 TIMM23O14925 209 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 NPFFO15130 113 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 SHOXO15266 292 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 SSSCA1O60232 199 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 SAA1P0DJI8 122 aaPredicted RBP5.36□□□□□ -1.55
VPS41-204ENST00000413141 IGHV4-31P0DP07 118 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 CXCL2P19875 107 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 SAA4P35542 130 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 ARHGDIBP52566 201 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 OR2B8PP59922 312 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 POLR2GP62487 172 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS41-204ENST00000413141 RELBQ01201 579 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 ID3Q02535 119 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 HABP2Q14520 560 aaPredicted RBP5.36□□□□□ -1.55
VPS41-204ENST00000413141 ZNF345Q14585 488 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 TMEM249Q2WGJ8 235 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 LGALSLQ3ZCW2 172 aaPredicted RBP5.36□□□□□ -1.55
VPS41-204ENST00000413141 AARDQ4LEZ3 155 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 CXorf66Q5JRM2 361 aaPredicted RBP5.36□□□□□ -1.55
VPS41-204ENST00000413141 OR4A47Q6IF82 309 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 MOB3BQ86TA1 216 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 ZNF546Q86UE3 836 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 PUSL1Q8N0Z8 303 aaKnown RBP5.36□□□□□ -1.55
VPS41-204ENST00000413141 OR8H3Q8N146 312 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 DYNAPQ8N1N2 210 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 MAPK1IP1LQ8NDC0 245 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 WFDC11Q8NEX6 87 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 OR4C13Q8NGP0 309 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 CFHR4Q92496 578 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 FLYWCH2Q96CP2 140 aaKnown RBP5.36□□□□□ -1.55
VPS41-204ENST00000413141 AJUBAQ96IF1 538 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 RHOVQ96L33 236 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 FOXC2Q99958 501 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 MAGT1Q9H0U3 335 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 C11orf1Q9H5F2 150 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 HIF1ANQ9NWT6 349 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 HSPB7Q9UBY9 170 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 HILPDAQ9Y5L2 63 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 AUP1Q9Y679 476 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 HECTD1Q9ULT8 2610 aa5.36□□□□□ -1.55
VPS41-204ENST00000413141 ASH1LQ9NR48 2969 aaKnown RBP5.36□□□□□ -1.55
VPS41-204ENST00000413141 PDZD2O15018 2839 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 CR1P17927 2039 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 TRAV3A0A0B4J244 114 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 IGHV1-69DA0A0B4J2H0 117 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 MSGN1A6NI15 193 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 E5RGE8 158 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 J3QLI3 93 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 L7N2F9 121 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 WRBO00258 174 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 LCE2BO14633 110 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 KCNAB3O43448 404 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 SNAPC5O75971 98 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 KBTBD11O94819 623 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 VENTXO95231 258 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 IGLV2-23P01705 113 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 IGHV1-69P01742 117 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 RLN2P04090 185 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 IL6RP08887 468 aaPredicted RBP5.35□□□□□ -1.55
VPS41-204ENST00000413141 CD1BP29016 333 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 LGALS4P56470 323 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 TNFRSF9Q07011 255 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 SSX2Q16385 188 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 RUSC1-AS1Q66K80 236 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 CCDC144NLQ6NUI1 221 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 ZNF429Q86V71 674 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 OR4A16Q8NH70 328 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 C17orf50Q8WW18 174 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 AQP10Q96PS8 301 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 AIFM2Q9BRQ8 373 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 QTRT1Q9BXR0 403 aaKnown RBP5.35□□□□□ -1.55
VPS41-204ENST00000413141 MS4A7Q9GZW8 240 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms