RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SLC16A13Q7RTY0 426 aa10.7□□□□□ -0.7
HLA-DQB2-229ENST00000411527 OSR1Q8TAX0 266 aaPredicted RBP10.7□□□□□ -0.7
HLA-DQB2-229ENST00000411527 RAB3CQ96E17 227 aa10.7□□□□□ -0.7
HLA-DQB2-229ENST00000411527 GINS4Q9BRT9 223 aa10.7□□□□□ -0.7
HLA-DQB2-229ENST00000411527 KRTAP17-1Q9BYP8 105 aa10.7□□□□□ -0.7
HLA-DQB2-229ENST00000411527 DMRT1Q9Y5R6 373 aa10.7□□□□□ -0.7
HLA-DQB2-229ENST00000411527 LGALS9O00182 355 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 DIRAS3O95661 229 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 SAA1P0DJI8 122 aaPredicted RBP10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CBLN1P23435 193 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CDK10Q15131 360 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 C10orf55Q5SWW7 151 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 MMD2Q8IY49 270 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 UFD1Q92890 307 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 OVOL2Q9BRP0 275 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 DCUN1D5Q9BTE7 237 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 ST6GALNAC5Q9BVH7 336 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 RAB22AQ9UL26 194 aa10.69□□□□□ -0.7
HLA-DQB2-229ENST00000411527 A0A075B6Q4 140 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 TMEM272A0A1B0GTI8 110 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 HMX3A6NHT5 357 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CREBL2O60519 120 aaPredicted RBP10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 ARL6IP5O75915 188 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 RPS25P62851 125 aaKnown RBP10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 PMS2P11Q13670 270 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 SLC25A42Q86VD7 318 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 TMEM61Q8N0U2 210 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 OR52B4Q8NGK2 314 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CACNG8Q8WXS5 425 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 GGTLC1Q9BX51 225 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 FBXL7Q9UJT9 491 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 ZNF257Q9Y2Q1 563 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 V9GY05 133 aa10.68□□□□□ -0.7
HLA-DQB2-229ENST00000411527 ZNF320A2RRD8 509 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CXorf65A6NEN9 183 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 J3QRK9 145 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 FCGR3BO75015 233 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 IGHV3-23P01764 117 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 HSMCR30P0CW71 290 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 GNB3P16520 340 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CALRP27797 417 aaKnown RBP10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 RANBP1P43487 201 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 HES5Q5TA89 166 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 ZNF57Q68EA5 555 aaPredicted RBP10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CLEC19AQ6UXS0 136 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 C19orf35Q6ZS72 473 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 GPHB5Q86YW7 130 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 H1FOOQ8IZA3 346 aaPredicted RBP10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 OR10R2Q8NGX6 335 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 S4R3C0 116 aa10.67□□□□□ -0.7
HLA-DQB2-229ENST00000411527 LOC102724200A0A096LPH7 203 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 DPPA5A6NC42 116 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 GADD45AP24522 165 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 ARL3P36405 182 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 IRF3Q14653 427 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 TRAM1Q15629 374 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 FAM106AQ4KMX7 169 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 VKORC1L1Q8N0U8 176 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 UXS1Q8NBZ7 420 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 OR51E2Q9H255 320 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 SCN3BQ9NY72 215 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 MLXQ9UH92 298 aa10.66□□□□□ -0.7
HLA-DQB2-229ENST00000411527 IGKV1D-8A0A087WSZ0 117 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 TMEM213A2RRL7 107 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 TEX22C9J3V5 150 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 MFNGO00587 321 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 SCAF4O95104 1147 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 NDUFB8O95169 186 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 IL6RP08887 468 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 HIST1H1DP16402 221 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 PSMA1P25786 263 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 TALDO1P37837 337 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 PSMD7P51665 324 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 ARFRP1Q13795 201 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 RCN1Q15293 331 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 ANKRD55Q3KP44 614 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 OR2B11Q5JQS5 317 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 KCTD9Q7L273 389 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CCDC140Q96MF4 163 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 FYTTD1Q96QD9 318 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 CENPOQ9BU64 300 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 PRELID3BQ9Y3B1 194 aa10.65□□□□□ -0.7
HLA-DQB2-229ENST00000411527 A0A0J9YWU9 116 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 NUPR2A6NF83 97 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 NPIPB5A8MRT5 1133 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 E7EUB6 86 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 RAB27BO00194 218 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 EBAG9O00559 213 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 MAP2K4P45985 399 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 RPL27AP46776 148 aaKnown RBP10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 RPL30P62888 115 aaKnown RBP10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 FABP5Q01469 135 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 TM4SF20Q53R12 229 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 OGFRL1Q5TC84 451 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 ZNF645Q8N7E2 425 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 FANCD2OSQ96PS1 177 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 SLC2A9Q9NRM0 540 aa10.64□□□□□ -0.71
HLA-DQB2-229ENST00000411527 MRPS7Q9Y2R9 242 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms