RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 KLK15Q9H2R5 256 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 SOX15O60248 233 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 SAA1P0DJI8 122 aaPredicted RBP16.19■□□□□ 0.18
VSX1-204ENST00000409958 CD33P20138 364 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 MYCNOSP40205 109 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 GNB1P62873 340 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 CATR1Q13166 79 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 PRSS8Q16651 343 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 MRGPRG-AS1Q2M3A8 158 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 ACTBL2Q562R1 376 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 LFNGQ8NES3 379 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 OR5M8Q8NGP6 311 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 OR52I2Q8NH67 350 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 GRPEL2Q8TAA5 225 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 SLIRPQ9GZT3 109 aaKnown RBP16.19■□□□□ 0.18
VSX1-204ENST00000409958 KLK11Q9UBX7 282 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 RBFOX2O43251 390 aaKnown RBP eCLIP16.19■□□□□ 0.18
VSX1-204ENST00000409958 CREBL2O60519 120 aaPredicted RBP16.19■□□□□ 0.18
VSX1-204ENST00000409958 RAB9AP51151 201 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 TSPAN5P62079 268 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 MRPS10P82664 201 aaKnown RBP16.19■□□□□ 0.18
VSX1-204ENST00000409958 KIAA0141Q14154 515 aaPredicted RBP16.19■□□□□ 0.18
VSX1-204ENST00000409958 RNASE12Q5GAN4 147 aaKnown RBP16.19■□□□□ 0.18
VSX1-204ENST00000409958 VAX1Q5SQQ9 334 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 SAMD5Q5TGI4 173 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 PYHIN1Q6K0P9 492 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 IDO2Q6ZQW0 420 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 UBE2E2Q96LR5 201 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 FXYD6Q9H0Q3 95 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 RABL2AQ9UBK7 228 aaPredicted RBP16.19■□□□□ 0.18
VSX1-204ENST00000409958 MTFP1Q9UDX5 166 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 RABL2BQ9UNT1 228 aa16.19■□□□□ 0.18
VSX1-204ENST00000409958 G3V4G9 280 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 WIPF1O43516 503 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 DEFA6Q01524 100 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 SPAG16Q8N0X2 631 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 LINC00482Q8N8I6 264 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 ZNF491Q8N8L2 437 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 VSTM2AQ8TAG5 236 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 C4orf3Q8WVX3 66 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 FCAMRQ8WWV6 532 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 DIRAS2Q96HU8 199 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 TMEM68Q96MH6 324 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 P2RX4Q99571 388 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 C6orf62Q9GZU0 229 aaPredicted RBP16.18■□□□□ 0.18
VSX1-204ENST00000409958 VSIG4Q9Y279 399 aa16.18■□□□□ 0.18
VSX1-204ENST00000409958 CCDC160A6NGH7 325 aa16.17■□□□□ 0.18
VSX1-204ENST00000409958 GABARAPH6UMI1 98 aa16.17■□□□□ 0.18
VSX1-204ENST00000409958 HRASP01112 189 aa16.17■□□□□ 0.18
VSX1-204ENST00000409958 MRPL41Q8IXM3 137 aaKnown RBP16.17■□□□□ 0.18
VSX1-204ENST00000409958 MMD2Q8IY49 270 aa16.17■□□□□ 0.18
VSX1-204ENST00000409958 CD300LFQ8TDQ1 290 aa16.17■□□□□ 0.18
VSX1-204ENST00000409958 RAX2Q96IS3 184 aa16.17■□□□□ 0.18
VSX1-204ENST00000409958 NXF2Q9GZY0 626 aaKnown RBP16.17■□□□□ 0.18
VSX1-204ENST00000409958 RBM38Q9H0Z9 239 aaKnown RBP16.17■□□□□ 0.18
VSX1-204ENST00000409958 CCL24O00175 119 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 RAMP3O60896 148 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 OR2A4O95047 310 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 TBPP20226 339 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 CD40LGP29965 261 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 TNXAQ16473 311 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 AADACL3Q5VUY0 350 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 LPCAT3Q6P1A2 487 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 CMTM1Q8IZ96 169 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 VKORC1L1Q8N0U8 176 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 PUSL1Q8N0Z8 303 aaKnown RBP16.16■□□□□ 0.18
VSX1-204ENST00000409958 OR51H1Q8NH63 302 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 RHOVQ96L33 236 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 OR2A7Q96R45 310 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 AIFM2Q9BRQ8 373 aa16.16■□□□□ 0.18
VSX1-204ENST00000409958 ZNF430Q9H8G1 570 aaPredicted RBP16.16■□□□□ 0.18
VSX1-204ENST00000409958 M0QYG6 137 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 GPR31O00270 319 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 CTDSPLO15194 276 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 PGLYRP1O75594 196 aaPredicted RBP16.15■□□□□ 0.18
VSX1-204ENST00000409958 ACTL6BO94805 426 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 DGCR2P98153 550 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 RUNX1Q01196 453 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 SSBP1Q04837 148 aaKnown RBP16.15■□□□□ 0.18
VSX1-204ENST00000409958 OXLD1Q5BKU9 147 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 RNASE10Q5GAN6 216 aaKnown RBP16.15■□□□□ 0.18
VSX1-204ENST00000409958 KPRPQ5T749 579 aaPredicted RBP16.15■□□□□ 0.18
VSX1-204ENST00000409958 POC5Q8NA72 575 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 MCFD2Q8NI22 146 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 TMEM167AQ8TBQ9 72 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 RCC1LQ96I51 464 aaKnown RBP16.15■□□□□ 0.18
VSX1-204ENST00000409958 SLA2Q9H6Q3 261 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 GNB4Q9HAV0 340 aa16.15■□□□□ 0.18
VSX1-204ENST00000409958 RSL24D1Q9UHA3 163 aaKnown RBP16.15■□□□□ 0.18
VSX1-204ENST00000409958 H3BUA1 57 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 ZNF701M0R085 212 aaPredicted RBP16.14■□□□□ 0.17
VSX1-204ENST00000409958 KBTBD11O94819 623 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 HPRT1P00492 218 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 CD3DP04234 171 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 IFNA6P05013 189 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 UCP3P55916 312 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 TAS2R31P59538 309 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 IL18Q14116 193 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 DEFB136Q30KP8 78 aa16.14■□□□□ 0.17
VSX1-204ENST00000409958 BEAN1Q3B7T3 259 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms