RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SAA1P0DJI8 122 aaPredicted RBP17.54■□□□□ 0.4
PTCD3-203ENST00000409783 VMA21Q3ZAQ7 101 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 LPCAT3Q6P1A2 487 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 NDUFA11Q86Y39 141 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 SPAG16Q8N0X2 631 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 OR4X2Q8NGF9 303 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 OR4C16Q8NGL9 310 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 OR51H1Q8NH63 302 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 THAP7Q9BT49 309 aaPredicted RBP17.54■□□□□ 0.4
PTCD3-203ENST00000409783 NUBP2Q9Y5Y2 271 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 WSB1Q9Y6I7 421 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 CMYA5Q8N3K9 4069 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 TSPAN15O95858 294 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 RLN1P04808 185 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 AKAIN1P0CW23 69 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 SLC35B1P78383 322 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 MEF2DQ14814 521 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 PYDC2Q56P42 97 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 IDO2Q6ZQW0 420 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 SLC38A6Q8IZM9 456 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 VKORC1L1Q8N0U8 176 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 COMMD1Q8N668 190 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 TERB2Q8NHR7 220 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 GON7Q9BXV9 100 aa17.53■□□□□ 0.4
PTCD3-203ENST00000409783 IGHG4P01861 327 aa17.52■□□□□ 0.4
PTCD3-203ENST00000409783 VDAC1P21796 283 aa17.52■□□□□ 0.4
PTCD3-203ENST00000409783 C2orf68Q2NKX9 166 aa17.52■□□□□ 0.4
PTCD3-203ENST00000409783 PHLDA2Q53GA4 152 aa17.52■□□□□ 0.4
PTCD3-203ENST00000409783 CMTM1Q8IZ96 169 aa17.52■□□□□ 0.4
PTCD3-203ENST00000409783 PUSL1Q8N0Z8 303 aaKnown RBP17.52■□□□□ 0.4
PTCD3-203ENST00000409783 Q8N402 240 aa17.52■□□□□ 0.4
PTCD3-203ENST00000409783 RNF152Q8N8N0 203 aa17.52■□□□□ 0.4
PTCD3-203ENST00000409783 MINDY2Q8NBR6 621 aa17.52■□□□□ 0.4
PTCD3-203ENST00000409783 FAM103A1Q9BTL3 118 aaKnown RBP17.52■□□□□ 0.4
PTCD3-203ENST00000409783 TRAV41A0A0B4J266 112 aa17.51■□□□□ 0.39
PTCD3-203ENST00000409783 TCRBV4S1A1TA0A5B7 111 aa17.51■□□□□ 0.39
PTCD3-203ENST00000409783 FXYD3Q14802 87 aa17.51■□□□□ 0.39
PTCD3-203ENST00000409783 PRSS8Q16651 343 aa17.51■□□□□ 0.39
PTCD3-203ENST00000409783 NSUN5P1Q3KNT7 163 aa17.51■□□□□ 0.39
PTCD3-203ENST00000409783 SPANXN2Q5MJ10 180 aa17.51■□□□□ 0.39
PTCD3-203ENST00000409783 TEX38Q6PEX7 206 aa17.51■□□□□ 0.39
PTCD3-203ENST00000409783 SRRQ9GZT4 340 aa17.51■□□□□ 0.39
PTCD3-203ENST00000409783 TSSC4Q9Y5U2 329 aaPredicted RBP17.51■□□□□ 0.39
PTCD3-203ENST00000409783 HPRT1P00492 218 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 OPN1MWP04001 364 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 OPN1MW2P0DN77 364 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 OPN1MW3P0DN78 364 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 F2RP25116 425 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 FOXE3Q13461 319 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 KLF9Q13886 244 aaPredicted RBP17.5■□□□□ 0.39
PTCD3-203ENST00000409783 POU2AF1Q16633 256 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 SCGB2B2Q4G0G5 96 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 ZNF585BQ52M93 769 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 CD300LFQ8TDQ1 290 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 ARPC1AQ92747 370 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 RHOVQ96L33 236 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 ZNF430Q9H8G1 570 aaPredicted RBP17.5■□□□□ 0.39
PTCD3-203ENST00000409783 PLEKHA2Q9HB19 425 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 SLC2A9Q9NRM0 540 aa17.5■□□□□ 0.39
PTCD3-203ENST00000409783 DISC1C4P0D8 188 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 SOX15O60248 233 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 S1PR2O95136 353 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 HRASP01112 189 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 IGLV1-40P01703 118 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 ELANEP08246 267 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 IL6RP08887 468 aaPredicted RBP17.49■□□□□ 0.39
PTCD3-203ENST00000409783 PSMB8P28062 276 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 PPP5CP53041 499 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 RND3P61587 244 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 ECSCRQ19T08 205 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 LCNL1Q6ZST4 164 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 TBC1D26Q86UD7 250 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 OR13C8Q8NGS7 320 aa17.49■□□□□ 0.39
PTCD3-203ENST00000409783 ZNF486Q96H40 463 aaPredicted RBP17.49■□□□□ 0.39
PTCD3-203ENST00000409783 KBTBD11O94819 623 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 OR2A4O95047 310 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 RPLP1P05386 114 aaKnown RBP17.48■□□□□ 0.39
PTCD3-203ENST00000409783 PGAM2P15259 253 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 PI3P19957 117 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 TAS2R31P59538 309 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 RPL23AP62750 156 aaKnown RBP17.48■□□□□ 0.39
PTCD3-203ENST00000409783 GNB1P62873 340 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 CNPY1Q3B7I2 92 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 AKIRIN2Q53H80 203 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 TCTEX1D1Q8N7M0 179 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 POC5Q8NA72 575 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 LFNGQ8NES3 379 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 TMEM167AQ8TBQ9 72 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 MARCH1Q8TCQ1 289 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 MYOZ3Q8TDC0 251 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 OR2A7Q96R45 310 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 SDHCQ99643 169 aaPredicted RBP17.48■□□□□ 0.39
PTCD3-203ENST00000409783 SLC2A8Q9NY64 477 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 MGAM2Q2M2H8 2515 aa17.48■□□□□ 0.39
PTCD3-203ENST00000409783 A0A1W2PRX2 142 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 LPAR6P43657 344 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 ASPHD1Q5U4P2 390 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 OR4A47Q6IF82 309 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 TREML4Q6UXN2 200 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 C18orf65Q6ZTR6 163 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms