RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 UNKLQ9H9P5 680 aaKnown RBP12.64□□□□□ -0.39
SHANK2-204ENST00000409530 TRAV14DV4A0A0A6YYC5 116 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 NPFFO15130 113 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 HLA-GP17693 338 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 UBE2E1P51965 193 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 RPS16P62249 146 aaKnown RBP12.64□□□□□ -0.39
SHANK2-204ENST00000409530 GPR157Q5UAW9 335 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 C11orf87Q6NUJ2 197 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 MBD2Q9UBB5 411 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 WASHC3Q9Y3C0 194 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 ABCA1O95477 2261 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 MYO9AB2RTY4 2548 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 TRAV3A0A0B4J244 114 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 OR9G9P0C7N8 305 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 CNTFRP26992 372 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 AP2S1P53680 142 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-204ENST00000409530 FBLN7Q53RD9 439 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 CXorf66Q5JRM2 361 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-204ENST00000409530 RHOVQ96L33 236 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 FOXC2Q99958 501 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 NMES1Q9C002 83 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 BOLA1Q9Y3E2 137 aa12.63□□□□□ -0.39
SHANK2-204ENST00000409530 LY6LH3BQJ8 138 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 ARPC5O15511 151 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 SSSCA1O60232 199 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 C1QBP02746 253 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 NQO2P16083 231 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 FAM71F2Q6NXP2 309 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 OR5AN1Q8NGI8 311 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 FLYWCH2Q96CP2 140 aaKnown RBP12.62□□□□□ -0.39
SHANK2-204ENST00000409530 SPIN2AQ99865 258 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 SPIN2BQ9BPZ2 258 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 OR5AC2Q9NZP5 309 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 TLN2Q9Y4G6 2542 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 DUXBA0A1W2PPF3 345 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 SRRM4A7MD48 611 aaKnown RBP12.62□□□□□ -0.39
SHANK2-204ENST00000409530 MPC2O95563 127 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 IGKV1D-33P01593 117 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 IGKV1-33P01594 117 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 MBPP02686 304 aaPredicted RBP12.62□□□□□ -0.39
SHANK2-204ENST00000409530 OPN1MWP04001 364 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 OPN1MW2P0DN77 364 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 OPN1MW3P0DN78 364 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 MYOD1P15172 320 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 SMCO1Q147U7 214 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 OR4A47Q6IF82 309 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 TCTEX1D1Q8N7M0 179 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 DCUN1D4Q92564 292 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 PLSCR3Q9NRY6 295 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 MMP24Q9Y5R2 645 aa12.62□□□□□ -0.39
SHANK2-204ENST00000409530 FLNBO75369 2602 aaKnown RBP12.62□□□□□ -0.39
SHANK2-204ENST00000409530 IGHV1-69DA0A0B4J2H0 117 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 OR2F2O95006 317 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 IGHV1-69P01742 117 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 SAA1P0DJI8 122 aaPredicted RBP12.61□□□□□ -0.39
SHANK2-204ENST00000409530 PSMB6P28072 239 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 POLR2GP62487 172 aaKnown RBP eCLIP12.61□□□□□ -0.39
SHANK2-204ENST00000409530 IL17RELQ6ZVW7 336 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 MS4A7Q9GZW8 240 aaPredicted RBP12.61□□□□□ -0.39
SHANK2-204ENST00000409530 TPSG1Q9NRR2 321 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 CSPG4Q6UVK1 2322 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 A0A0U1RQK1 487 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 RBFOX2O43251 390 aaKnown RBP eCLIP12.61□□□□□ -0.398e-7■■■□□ 16.8
SHANK2-204ENST00000409530 SLC25A17O43808 307 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
SHANK2-204ENST00000409530 GZMKP49863 264 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 CYCSP99999 105 aaKnown RBP12.61□□□□□ -0.39
SHANK2-204ENST00000409530 PDPNQ86YL7 162 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 THAP6Q8TBB0 222 aa12.61□□□□□ -0.39
SHANK2-204ENST00000409530 RCL1Q9Y2P8 373 aaKnown RBP12.61□□□□□ -0.39
SHANK2-204ENST00000409530 H0YIZ8 118 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 H3BP45 60 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 WRBO00258 174 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 TXNL1O43396 289 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 ATG12O94817 140 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 SNRNP70P08621 437 aaKnown RBP12.6□□□□□ -0.39
SHANK2-204ENST00000409530 IAPPP10997 89 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 KLF17Q5JT82 389 aaPredicted RBP12.6□□□□□ -0.39
SHANK2-204ENST00000409530 OR4D5Q8NGN0 318 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 OR4C13Q8NGP0 309 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
SHANK2-204ENST00000409530 CLCC1Q96S66 551 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
SHANK2-204ENST00000409530 GON7Q9BXV9 100 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 TET2Q6N021 2002 aaPredicted RBP12.6□□□□□ -0.39
SHANK2-204ENST00000409530 OTOGQ6ZRI0 2925 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 BAHCC1Q9P281 2608 aa12.6□□□□□ -0.39
SHANK2-204ENST00000409530 K7EPK0 472 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 HRASP01112 189 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 FAM120AOSQ5T036 256 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 CYB5R2Q6BCY4 276 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 DHRS7BQ6IAN0 325 aaPredicted RBP12.59□□□□□ -0.39
SHANK2-204ENST00000409530 FAM71E2Q8N5Q1 922 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 OR4A16Q8NH70 328 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 HINT2Q9BX68 163 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 ACANP16112 2415 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 MDFIC2A0A1B0GVS7 189 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 VENTXO95231 258 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms