RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ULBP2Q9BZM5 246 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 HS3ST3A1Q9Y663 406 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 CNOT1A5YKK6 2376 aaKnown RBP4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 SHANK1Q9Y566 2161 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 ATG2BQ96BY7 2078 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 A0A1B0GV72 72 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 LRRC30A6NM36 301 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 NPIPA3F8WFD2 350 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 VAMP5O95183 116 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 IGLV2-14P01704 120 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 CD46P15529 392 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 OPRK1P41145 380 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 TNFRSF4P43489 277 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 KLF5Q13887 457 aaPredicted RBP4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 PRSS57Q6UWY2 283 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 C18orf32Q8TCD1 76 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 RNF138Q8WVD3 245 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 SF3B5Q9BWJ5 86 aaKnown RBP4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 OR2D2Q9H210 308 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 SAP30LQ9HAJ7 183 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 ZNF331Q9NQX6 463 aaPredicted RBP4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 PPP1R3CQ9UQK1 317 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 WDR83OSQ9Y284 106 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 OR51B2Q9Y5P1 312 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 CRXO43186 299 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 FRMD6-AS1P0C7T7 363 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 LINC00271P0C7V0 271 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 AREGP15514 252 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 GNG4P50150 75 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 DUSP3P51452 185 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 IGFBP7Q16270 282 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 RSPO4Q2I0M5 234 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 KRTAP27-1Q3LI81 207 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 WIPF2Q8TF74 440 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 TMEM186Q96B77 213 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 VWCEQ96DN2 955 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 COMMD5Q9GZQ3 224 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 C19orf25Q9UFG5 118 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 KCNS2Q9ULS6 477 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 ARL2-SNX15V9GYD0 113 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 LTBP2Q14767 1821 aa4.9□□□□□ -1.63
R3HDM1-202ENST00000409478 OR4C46A6NHA9 309 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 CELA2BP08218 269 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 DEFA4P12838 97 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 CRYBB3P26998 211 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 PLA2G5P39877 138 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 PSG3Q16557 428 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 EBLN2Q6P2I7 272 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 MOB1BQ7L9L4 216 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 MKXQ8IYA7 352 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 NEUROG1Q92886 237 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 SPSB4Q96A44 273 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 LRRC61Q9BV99 259 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 BRCA2P51587 3418 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 SMIM27A0A1W2PRY6 76 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 C2orf70A6NJV1 201 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 TRAPPC2LH3BP13 241 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 HSPB6O14558 160 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 SAP30O75446 220 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 SMIM17P0DL12 118 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 USF1P22415 310 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 PTGDSP41222 190 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 KIR2DL1P43626 348 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 EDDM3BP56851 147 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 SEC11AP67812 179 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 TNXAQ16473 311 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 WDR74Q6RFH5 385 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 LMX1AQ8TE12 382 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 TMEM45BQ96B21 275 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 AP1S3Q96PC3 154 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 PMCHL2Q9BQD1 86 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 MTCH1Q9NZJ7 389 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 SMPXQ9UHP9 88 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 IZUMO1RA6ND01 250 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 ISLRO14498 428 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 GPR6P46095 362 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 PDLIM3Q53GG5 364 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 Q8N7P7 452 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 ZBTB34Q8NCN2 500 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 OR1B1Q8NGR6 318 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 CPT1CQ8TCG5 803 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 IL1F10Q8WWZ1 152 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 SARAFQ96BY9 339 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 MS4A6AQ9H2W1 248 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 METTL7AQ9H8H3 244 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 YTHDF2Q9Y5A9 579 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 CUL9Q8IWT3 2517 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 TRAV8-6A0A0B4J262 113 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 AHRRA9YTQ3 701 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 SPINK4O60575 86 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 ZG16O60844 167 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 CELA3BP08861 270 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 CA7P43166 264 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 LGALS7P47929 136 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 TIGITQ495A1 244 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 TMEM196Q5HYL7 178 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 UFSP1Q6NVU6 142 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 OR13H1Q8NG92 308 aa4.89□□□□□ -1.63
R3HDM1-202ENST00000409478 TMEM191AQ9H0A3 160 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms