RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GRIFINA4D1Z8 144 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 C11orf94C9JXX5 98 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 G3V4G9 280 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 CGAP01215 116 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 IGKV1D-33P01593 117 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 IGKV1-33P01594 117 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 OR10J4P0C629 311 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 C3orf79P0CE67 100 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 ARL4DP49703 201 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 RPS18P62269 152 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 NNATQ16517 81 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 HIST3H3Q16695 136 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 CLEC12BQ2HXU8 276 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 TMEM14EPQ6UXP3 125 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 LHFPL2Q6ZUX7 228 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 HAPLN4Q86UW8 402 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 ABHD3Q8WU67 409 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 DNAJA3Q96EY1 480 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 LYZL4Q96KX0 146 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 KLHDC3Q9BQ90 382 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 NXF5Q9H1B4 397 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 ST20Q9HBF5 79 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 ZNF160Q9HCG1 818 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 ALKBH4Q9NXW9 302 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 PSENENQ9NZ42 101 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 UTP20O75691 2785 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 HECTD1Q9ULT8 2610 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 KIAA2026Q5HYC2 2103 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 TMEM150CB9EJG8 249 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 C9JCJ5 164 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 H3BMH7 237 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 SCRG1O75711 98 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 IGHG1P01857 330 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 SMIM17P0DL12 118 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 F2RP25116 425 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 GNB1P62873 340 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 ARL16Q0P5N6 197 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 MALLQ13021 153 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 CNN3Q15417 329 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 VWC2Q2TAL6 325 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 OR52L2PQ8NGH6 319 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 OR10G9Q8NGN4 311 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 OR10G7Q8NGN6 311 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 CT55Q8WUE5 264 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 RBM24Q9BX46 236 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 SLC7A10Q9NS82 523 aa8.97□□□□□ -0.97
NIF3L1-204ENST00000409357 TNRC6AQ8NDV7 1962 aaKnown RBP8.96□□□□□ -0.97
NIF3L1-204ENST00000409357 GAGE12BA1L429 117 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 PAGE4O60829 102 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 IGKV3-11P04433 115 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 LINC00869P0C866 280 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 PSG1P11464 419 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 AMTP48728 403 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 FOXL2P58012 376 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 SELENOVP59797 346 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 TMEM267Q0VDI3 215 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 TESK1Q15569 626 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 MRPL54Q6P161 138 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 FOXL2NBQ6ZUU3 175 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 BHLHA15Q7RTS1 189 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 SHISA5Q8N114 240 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 OSR2Q8N2R0 312 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 OR10P1Q8NGE3 313 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 TMEM147Q9BVK8 224 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 RTN4RQ9BZR6 473 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 GNB4Q9HAV0 340 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 HES4Q9HCC6 221 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 RNF114Q9Y508 228 aa8.96□□□□□ -0.98
NIF3L1-204ENST00000409357 PTPN13Q12923 2485 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 KIR2DS1A0A191URI9 304 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 SLC22A20A6NK97 555 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 GJE1A6NN92 205 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 FCN1O00602 326 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 PGLYRP1O75594 196 aaPredicted RBP8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 IGLC1P0CG04 106 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 GLI4P10075 376 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 KIR2DS4P43632 304 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 FBXW4P57775 412 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 POU3F1Q03052 451 aaPredicted RBP8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 ZNF90Q03938 601 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 SLC38A11Q08AI6 406 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 KIR2DS1Q14954 304 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 DEFB109BQ30KR1 87 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 C9orf135Q5VTT2 229 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 TMEM42Q69YG0 159 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 ACSM6Q6P461 480 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 RASL11AQ6T310 242 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 ZNF818PQ6ZRF7 136 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 OR10G3Q8NGC4 313 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 BORCS7Q96B45 105 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 QTRT1Q9BXR0 403 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 PEF1Q9UBV8 284 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 ZNF391Q9UJN7 358 aa8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 USP9XQ93008 2570 aaPredicted RBP8.95□□□□□ -0.98
NIF3L1-204ENST00000409357 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.94□□□□□ -0.98
NIF3L1-204ENST00000409357 SH2D1BO14796 132 aa8.94□□□□□ -0.98
NIF3L1-204ENST00000409357 CA2P00918 260 aa8.94□□□□□ -0.98
NIF3L1-204ENST00000409357 CBLN1P23435 193 aa8.94□□□□□ -0.98
NIF3L1-204ENST00000409357 IL12BP29460 328 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms