RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SCOCQ9UIL1 159 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 SPATA2Q9UM82 520 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 SMAD5-AS1Q9Y6J3 95 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 IGKV1D-8A0A087WSZ0 117 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 DPPA5A6NC42 116 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 LINC00473A8K010 186 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 AIREO43918 545 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 DHFRP00374 187 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 LINC00205P59089 165 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 HERV-K104P61576 105 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 HOGA1Q86XE5 327 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 ANKRD13BQ86YJ7 626 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 OR5T1Q8NG75 326 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 CASTOR1Q8WTX7 329 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 KCTD12Q96CX2 325 aaKnown RBP7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 SLC25A38Q96DW6 304 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 C5orf30Q96GV9 206 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 ALX4Q9H161 411 aaPredicted RBP7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 AUNIPQ9H7T9 357 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 IFT46Q9NQC8 304 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 PEMTQ9UBM1 199 aa7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 LSM4Q9Y4Z0 139 aaKnown RBP7.01□□□□□ -1.29
SNORD88A-201ENST00000408314 MSGN1A6NI15 193 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 H0Y980 276 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 SSX5O60225 188 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 KBTBD11O94819 623 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 OR2A4O95047 310 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 SAA1P0DJI8 122 aaPredicted RBP7□□□□□ -1.29
SNORD88A-201ENST00000408314 FCGR2CP31995 323 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 PJVKQ0ZLH3 352 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 RPEL1Q2QD12 228 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 UBE2NLQ5JXB2 153 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 ZNF343Q6P1L6 599 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 ADAD2Q8NCV1 583 aaKnown RBP7□□□□□ -1.29
SNORD88A-201ENST00000408314 TSPAN14Q8NG11 270 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 OR13F1Q8NGS4 319 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 OR4A5Q8NH83 315 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 CD300LFQ8TDQ1 290 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 SNAPC3Q92966 411 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 OR2A7Q96R45 310 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 ZNF430Q9H8G1 570 aaPredicted RBP7□□□□□ -1.29
SNORD88A-201ENST00000408314 PEF1Q9UBV8 284 aaKnown RBP7□□□□□ -1.29
SNORD88A-201ENST00000408314 ELF5Q9UKW6 265 aaPredicted RBP7□□□□□ -1.29
SNORD88A-201ENST00000408314 ZNF257Q9Y2Q1 563 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 SORL1Q92673 2214 aa7□□□□□ -1.29
SNORD88A-201ENST00000408314 SRRM4A7MD48 611 aaKnown RBP6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 J3QRK9 145 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 CYB5BO43169 146 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 RBFOX2O43251 390 aaKnown RBP eCLIP6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 XRCC3O43542 346 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 PPYP01298 95 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 FGF2P09038 288 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 CLEC2LP0C7M8 214 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 GP9P14770 177 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 S100GP29377 79 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 TAS2R46P59540 309 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 SSBP2P81877 361 aaPredicted RBP6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 ATP5G2Q06055 141 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 OR2B11Q5JQS5 317 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 TMEM69Q5SWH9 247 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 THOC7Q6I9Y2 204 aaKnown RBP6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 SGPP2Q8IWX5 399 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 MFSD4AQ8N468 514 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 NECAP1Q8NC96 275 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 OR5AP2Q8NGF4 316 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 OR5H6Q8NGV6 325 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 TMEM167AQ8TBQ9 72 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 SECTM1Q8WVN6 248 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 CMTM3Q96MX0 182 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 RSRP1Q9BUV0 290 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 SLC5A7Q9GZV3 580 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 TAS2R8Q9NYW2 309 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 U3KQK5 164 aa6.99□□□□□ -1.29
SNORD88A-201ENST00000408314 IGKV1D-13A0A0B4J2D9 117 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 SMIM31A0A1B0GVY4 71 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 IGLV1-51P01701 117 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 IGKV1-13P0DP09 117 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 SPNP16150 400 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 HIST1H1BP16401 226 aaKnown RBP6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 RPL27AP46776 148 aaKnown RBP6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 TAS2R31P59538 309 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 ERVK-16P61578 105 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 RPL8P62917 257 aaKnown RBP6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 RHOGP84095 191 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 EXOSC2Q13868 293 aaKnown RBP6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 KLF5Q13887 457 aaPredicted RBP6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 LCN12Q6JVE5 192 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 C11orf87Q6NUJ2 197 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 IDO2Q6ZQW0 420 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 CMTM1Q8IZ96 169 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 SPAG16Q8N0X2 631 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 TTC9CQ8N5M4 171 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 SAMD12Q8N8I0 201 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 OR9G4Q8NGQ1 327 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 GIMAP1Q8WWP7 306 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 BET1LQ9NYM9 111 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 SIGLEC8Q9NYZ4 499 aa6.98□□□□□ -1.29
SNORD88A-201ENST00000408314 TRBV9A0A0B4J1U6 114 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms