RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 BAP18Q8IXM2 172 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 ZNF295-AS1Q8N0V1 137 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 PUSL1Q8N0Z8 303 aaKnown RBP8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 TMEM252Q8N6L7 170 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 ZNF525Q8N782 197 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 Q8N7P7 452 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 UBAC2Q8NBM4 344 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 ST8SIA2Q92186 375 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 ZNF471Q9BX82 626 aaPredicted RBP8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 BPESC1Q9GZL8 116 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 BEX4Q9NWD9 120 aaPredicted RBP8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 BET1LQ9NYM9 111 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 DPM3Q9P2X0 92 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 ONECUT1Q9UBC0 465 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 PRNDQ9UKY0 176 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 INSIG2Q9Y5U4 225 aa8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 HRNRQ86YZ3 2850 aaPredicted RBP8.4□□□□□ -1.06
SNORD88C-201ENST00000408061 SPTAN1Q13813 2472 aaKnown RBP8.4□□□□□ -1.07
SNORD88C-201ENST00000408061 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 SSSCA1O60232 199 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 DFFBO76075 338 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 USF1P22415 310 aaPredicted RBP8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 SULT1A1P50225 295 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 CAV2P51636 162 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 ARF6P62330 175 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 HBG1P69891 147 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 HBG2P69892 147 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 EXOSC2Q13868 293 aaKnown RBP8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 ATP6V1FQ16864 119 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 C1orf229Q6ZS94 237 aaPredicted RBP8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 STPG2Q8N412 459 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 SLC25A32Q9H2D1 315 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 LPAR2Q9HBW0 351 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 CYTL1Q9NRR1 136 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 PSENENQ9NZ42 101 aa8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 FOXA2Q9Y261 457 aaPredicted RBP8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 TBL2Q9Y4P3 447 aaKnown RBP8.39□□□□□ -1.07
SNORD88C-201ENST00000408061 ARID1AO14497 2285 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 MSGN1A6NI15 193 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 C15orf61A6NNL5 157 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 ODF3BA8MYP8 253 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 H7C2Y5 167 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 SHOXO15266 292 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 RBMXL2O75526 392 aaKnown RBP8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 GATA3P23771 443 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 CD1BP29016 333 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 PAX9P55771 341 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 HSPE1P61604 102 aaKnown RBP8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 RELBQ01201 579 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 EWSR1Q01844 656 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 VMA21Q3ZAQ7 101 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 UTF1Q5T230 341 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 TEX45Q8NA69 505 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 OR4P4Q8NGL7 312 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 OR5B3Q8NH48 314 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 RPEQ96AT9 228 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 TSNAXQ99598 290 aaKnown RBP8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 MRPL20Q9BYC9 149 aaKnown RBP8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 MS4A7Q9GZW8 240 aaPredicted RBP8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 MAGT1Q9H0U3 335 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 ARV1Q9H2C2 271 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 HIPK2Q9H2X6 1198 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 TMEM14BQ9NUH8 114 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 TMEM140Q9NV12 185 aa8.38□□□□□ -1.07
SNORD88C-201ENST00000408061 IGHV1-3A0A0C4DH29 117 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 INS-IGF2F8WCM5 200 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 UPK2O00526 184 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 TSPAN9O75954 239 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 KBTBD11O94819 623 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 SPDEFO95238 335 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 IFNA17P01571 189 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 SEC11BP0C7V7 166 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 ZFP36P26651 326 aaKnown RBP8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 MAS1LP35410 378 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 UBE2E1P51965 193 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 DVL1P1P54792 670 aaPredicted RBP8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 HABP2Q14520 560 aaPredicted RBP8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 ZNF787Q6DD87 383 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 OR4A47Q6IF82 309 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 MRPL41Q8IXM3 137 aaKnown RBP8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 PNKDQ8N490 385 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 OR1S2Q8NGQ3 325 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 TMEM167AQ8TBQ9 72 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 DTD1Q8TEA8 209 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 MBD6Q96DN6 1003 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 C1orf159Q96HA4 380 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 PARD6GQ9BYG4 376 aaPredicted RBP8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 SIRPDQ9H106 197 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 RBKSQ9H477 322 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 MED9Q9NWA0 146 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 FBXL17Q9UF56 701 aa8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 STRAPQ9Y3F4 350 aaKnown RBP8.37□□□□□ -1.07
SNORD88C-201ENST00000408061 LRBAP50851 2863 aa8.36□□□□□ -1.07
SNORD88C-201ENST00000408061 LINC00862A6NCI5 91 aa8.36□□□□□ -1.07
SNORD88C-201ENST00000408061 FAM24AA6NFZ4 105 aa8.36□□□□□ -1.07
SNORD88C-201ENST00000408061 CEBPZOSA8MTT3 80 aa8.36□□□□□ -1.07
SNORD88C-201ENST00000408061 SOX15O60248 233 aa8.36□□□□□ -1.07
SNORD88C-201ENST00000408061 TOX4O94842 621 aa8.36□□□□□ -1.07
SNORD88C-201ENST00000408061 TMEM50AO95807 157 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms