RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 ZNF726P1Q15940 193 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 HFEQ30201 348 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 AWAT1Q58HT5 328 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 ZNF787Q6DD87 383 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 ZNF383Q8NA42 475 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 ST6GALNAC3Q8NDV1 305 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 RCC1LQ96I51 464 aaKnown RBP13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 MS4A5Q9H3V2 200 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 SMCO4Q9NRQ5 59 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 ATMQ13315 3056 aa13.64□□□□□ -0.23
PIKFYVE-204ENST00000407449 SRP19P09132 144 aaKnown RBP13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 DAOP14920 347 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 FGF7P21781 194 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 ELLP55199 621 aaPredicted RBP13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 RPL31P62899 125 aaKnown RBP13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 KHDC3LQ587J8 217 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 SOHLH1Q5JUK2 328 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 ZNF429Q86V71 674 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 VKORC1L1Q8N0U8 176 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 CCL17Q92583 94 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 NEUROG1Q92886 237 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 DMXL2Q8TDJ6 3036 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 LOC102723971A0A1B0GUV8 181 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 TNFRSF13BO14836 293 aaPredicted RBP13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 CHRNB4P30926 498 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 APOBEC3AP31941 199 aaPredicted RBP13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 AIFM2Q9BRQ8 373 aa13.63□□□□□ -0.23
PIKFYVE-204ENST00000407449 C15orf61A6NNL5 157 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 B9A039 149 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 M0R036 132 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 VDAC2P45880 294 aaPredicted RBP13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 RHEBQ15382 184 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 POU2AF1Q16633 256 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 RXFP4Q8TDU9 374 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 ZNF714Q96N38 554 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 RPS10P5Q9NQ39 176 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 PCNX1Q96RV3 2341 aa13.62□□□□□ -0.23
PIKFYVE-204ENST00000407449 TRAV3A0A0B4J244 114 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 C7orf77A4D0Y5 90 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 FAM90A27PA6NNH2 459 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 NDUFB3O43676 98 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 FCN3O75636 299 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 MBP02144 154 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 MDKP21741 143 aaPredicted RBP13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 PAX6P26367 422 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 RPS16P62249 146 aaKnown RBP13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 AKIRIN2Q53H80 203 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 LCN15Q6UWW0 184 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 HEPN1Q6WQI6 88 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 SSX7Q7RTT5 188 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 ZCCHC14Q8WYQ9 949 aaKnown RBP13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 RHOVQ96L33 236 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 HEYLQ9NQ87 328 aaPredicted RBP13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 FOXA2Q9Y261 457 aaPredicted RBP13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 TLN1Q9Y490 2541 aaKnown RBP13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 DOCK11Q5JSL3 2073 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 MAP1LC3B2A6NCE7 125 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 H7C2Y5 167 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 HRASP01112 189 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 SNRNP70P08621 437 aaKnown RBP13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 TFF3Q07654 80 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 LRRC10Q5BKY1 277 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 OR4A47Q6IF82 309 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 ACSM6Q6P461 480 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 ETV3LQ6ZN32 361 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 OR10G4Q8NGN3 311 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 NPCDR1Q9BY65 106 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 MAP1LC3BQ9GZQ8 125 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 GNG13Q9P2W3 67 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 TCF19Q9Y242 345 aa13.61□□□□□ -0.23
PIKFYVE-204ENST00000407449 C17orf112F2Z3M2 114 aa13.6□□□□□ -0.23
PIKFYVE-204ENST00000407449 CCL21O00585 134 aa13.6□□□□□ -0.23
PIKFYVE-204ENST00000407449 IFNA10P01566 189 aa13.6□□□□□ -0.23
PIKFYVE-204ENST00000407449 TMEM200BQ69YZ2 307 aa13.6□□□□□ -0.23
PIKFYVE-204ENST00000407449 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
PIKFYVE-204ENST00000407449 KAAG1Q9UBP8 84 aa13.6□□□□□ -0.23
PIKFYVE-204ENST00000407449 TET2Q6N021 2002 aaPredicted RBP13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 IGKV1D-33P01593 117 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 IGKV1-33P01594 117 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 CT45A6P0DMU7 189 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 CT45A5P0DMU8 189 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 CT45A7P0DMV0 189 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 BCL2P10415 239 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 CCL3L1P16619 93 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 HOXA1P49639 335 aaPredicted RBP13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 RTL8BQ17RB0 113 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 LYPD2Q6UXB3 125 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 ZNF833PQ6ZTB9 187 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 ZNF709Q8N972 641 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 H1FXQ92522 213 aaKnown RBP13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 RAB39BQ96DA2 213 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 GGACTQ9BVM4 153 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 SLC35D1Q9NTN3 355 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 TMEM14BQ9NUH8 114 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 WDR83OSQ9Y284 106 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 DCHS1Q96JQ0 3298 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 YLPM1P49750 1951 aaKnown RBP13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 IGHV1-69-2A0A0G2JMI3 117 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms