RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 A0A1B0GV50 99 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 SFTA3P0C7M3 94 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 OR52E5Q8NH55 327 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 PINX1Q96BK5 328 aaKnown RBP20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 PSMG3Q9BT73 122 aaPredicted RBP20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 PBDC1Q9BVG4 233 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 WDR61Q9GZS3 305 aaKnown RBP20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 EIF5A2Q9GZV4 153 aaKnown RBP20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 ZNRD1Q9P1U0 126 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 HRASP01112 189 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 CT45A6P0DMU7 189 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 CT45A5P0DMU8 189 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 CT45A7P0DMV0 189 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 TLE4Q04727 773 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 RTL8BQ17RB0 113 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 RHOVQ96L33 236 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 TMEM147Q9BVK8 224 aa20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 NKX6-2Q9C056 277 aaPredicted RBP20.21■□□□□ 0.83
DNMT3A-206ENST00000406659 ANKHD1Q8IWZ3 2542 aaKnown RBP20.2■□□□□ 0.82
DNMT3A-206ENST00000406659 TRAV3A0A0B4J244 114 aa20.2■□□□□ 0.82
DNMT3A-206ENST00000406659 UBE2L5PA0A1B0GUS4 154 aa20.2■□□□□ 0.82
DNMT3A-206ENST00000406659 GUCA2BQ16661 112 aa20.2■□□□□ 0.82
DNMT3A-206ENST00000406659 SLC35D1Q9NTN3 355 aa20.2■□□□□ 0.82
DNMT3A-206ENST00000406659 C9JQL5 133 aa20.19■□□□□ 0.82
DNMT3A-206ENST00000406659 RPP30P78346 268 aaKnown RBP20.19■□□□□ 0.82
DNMT3A-206ENST00000406659 ZNF833PQ6ZTB9 187 aa20.19■□□□□ 0.82
DNMT3A-206ENST00000406659 TAF15Q92804 592 aaKnown RBP eCLIP20.19■□□□□ 0.82
DNMT3A-206ENST00000406659 KALRNO60229 2985 aa20.19■□□□□ 0.82
DNMT3A-206ENST00000406659 COL6A6A6NMZ7 2263 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 BTBD17A6NE02 478 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 PMS2P5A8MQ11 134 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 GPR37O15354 613 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 SCAF4O95104 1147 aaKnown RBP20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 OR4A47Q6IF82 309 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 RAB1BQ9H0U4 201 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 HIPK2Q9H2X6 1198 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 HEYLQ9NQ87 328 aaPredicted RBP20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 DOCK11Q5JSL3 2073 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 NBASA2RRP1 2371 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 RAB2AP61019 212 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 RPS16P62249 146 aaKnown RBP20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 GNB2P62879 340 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 SERF2P84101 59 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 TMEM155Q4W5P6 130 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 PDLIM3Q53GG5 364 aaPredicted RBP20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 DHRS7BQ6IAN0 325 aaPredicted RBP20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 ZNF429Q86V71 674 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 SCRT1Q9BWW7 348 aa20.18■□□□□ 0.82
DNMT3A-206ENST00000406659 TRBV23-1A0A0A0MS06 115 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 FSTL3O95633 263 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 DLX6P56179 175 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 SPSB3Q6PJ21 355 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 PUSL1Q8N0Z8 303 aaKnown RBP20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 OR13D1Q8NGV5 346 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 OR10X1Q8NGY0 326 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 SFT2D1Q8WV19 159 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 CBLN4Q9NTU7 201 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 PIEZO1Q92508 2521 aa20.17■□□□□ 0.82
DNMT3A-206ENST00000406659 C15orf61A6NNL5 157 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 C15orf62A8K5M9 175 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 FAM157AC9JC47 383 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 HBE1P02100 147 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 POU2AF1Q16633 256 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 C8orf31Q8N9H6 132 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 RALYQ9UKM9 306 aaKnown RBP20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 TCF19Q9Y242 345 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 A0A1B0GW64 132 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 J3QR06 171 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 IFNA10P01566 189 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 IGHV2-70P01814 119 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 PPT1P50897 306 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 CCL20P78556 96 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 LINC00311Q8N616 119 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 AIFM2Q9BRQ8 373 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 MRPL20Q9BYC9 149 aaKnown RBP20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 FOXA2Q9Y261 457 aaPredicted RBP20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 TIMM9Q9Y5J7 89 aa20.16■□□□□ 0.82
DNMT3A-206ENST00000406659 TMEM8BA6NDV4 472 aa20.15■□□□□ 0.82
DNMT3A-206ENST00000406659 SNAPINO95295 136 aa20.15■□□□□ 0.82
DNMT3A-206ENST00000406659 APOA2P02652 100 aa20.15■□□□□ 0.82
DNMT3A-206ENST00000406659 ARG1P05089 322 aa20.15■□□□□ 0.82
DNMT3A-206ENST00000406659 VDAC2P45880 294 aaPredicted RBP20.15■□□□□ 0.82
DNMT3A-206ENST00000406659 HOXA1P49639 335 aaPredicted RBP20.15■□□□□ 0.82
DNMT3A-206ENST00000406659 RPRMQ9NS64 109 aa20.15■□□□□ 0.82
DNMT3A-206ENST00000406659 FGF7P21781 194 aa20.14■□□□□ 0.81
DNMT3A-206ENST00000406659 TAGLNQ01995 201 aaKnown RBP20.14■□□□□ 0.81
DNMT3A-206ENST00000406659 ZNF596Q8TC21 504 aa20.14■□□□□ 0.81
DNMT3A-206ENST00000406659 TMEM14BQ9NUH8 114 aa20.14■□□□□ 0.81
DNMT3A-206ENST00000406659 F12P00748 615 aaPredicted RBP20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 HSPE1P61604 102 aaKnown RBP20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 C4orf17Q53FE4 359 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 AVPI1Q5T686 147 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 KPTNQ9Y664 436 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 RBFOX3A6NFN3 312 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 H7C2Y5 167 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 IGKV1-16P04430 117 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 IGHV1-8P0DP01 117 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 TMEM41BQ5BJD5 291 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 OR9G1Q8NH87 305 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 TMEM186Q96B77 213 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms