RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 RPL30P62888 115 aaKnown RBP8.39□□□□□ -1.07
RPAIN-204ENST00000405578 EIF4EBP1Q13541 118 aaPredicted RBP8.39□□□□□ -1.07
RPAIN-204ENST00000405578 RBMS2Q15434 407 aaKnown RBP8.39□□□□□ -1.07
RPAIN-204ENST00000405578 BEAN1Q3B7T3 259 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 VMA21Q3ZAQ7 101 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 TMEM177Q53S58 311 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 OR2B11Q5JQS5 317 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 C9orf152Q5JTZ5 239 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 MZT2BQ6NZ67 158 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 TBC1D26Q86UD7 250 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 NPBQ8NG41 125 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 VSTM2AQ8TAG5 236 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 FAM110DQ8TAY7 271 aaPredicted RBP8.39□□□□□ -1.07
RPAIN-204ENST00000405578 DDB2Q92466 427 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 TSC22D3Q99576 134 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 KCNIP3Q9Y2W7 256 aa8.39□□□□□ -1.07
RPAIN-204ENST00000405578 PIGBOS1A0A0B4J2F0 54 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 TEX13DA0A0J9YY54 714 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-204ENST00000405578 CLPSL1A2RUU4 121 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 G3V4G9 280 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 RRHO14718 337 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 LYRM1O43325 122 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 TSPAN9O75954 239 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 ATG12O94817 140 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 HPRT1P00492 218 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 DEFA1P59665 94 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 DEFA3P59666 94 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 ERVK-16P61578 105 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 RELBQ01201 579 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 PSG5Q15238 335 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 C5orf64Q2M2E5 130 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 LIN54Q6MZP7 749 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 SGPP2Q8IWX5 399 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 C5orf56Q8N8D9 126 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 GPHA2Q96T91 129 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 PLEKHA2Q9HB19 425 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 FAM212BQ9NTI7 297 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-204ENST00000405578 COMMD9Q9P000 198 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 METTL1Q9UBP6 276 aaKnown RBP8.38□□□□□ -1.07
RPAIN-204ENST00000405578 GPR132Q9UNW8 380 aa8.38□□□□□ -1.07
RPAIN-204ENST00000405578 C3orf85A0A1B0GTC6 90 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 H0Y980 276 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 ACTL6BO94805 426 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 NDUFA3O95167 84 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 ANXA3P12429 323 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 RPA2P15927 270 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 NQO2P16083 231 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 PI3P19957 117 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 VDAC2P45880 294 aaPredicted RBP8.37□□□□□ -1.07
RPAIN-204ENST00000405578 F2RL1P55085 397 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 TAS2R31P59538 309 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 UBE2KP61086 200 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 BLCAPP62952 87 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 Q6ZSV7 163 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 TMED4Q7Z7H5 227 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 FOXRED2Q8IWF2 684 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 FAM71E2Q8N5Q1 922 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 Q8N9W7 124 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 TEX45Q8NA69 505 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 MRAPQ8TCY5 172 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 RITA1Q96K30 269 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 C5orf66Q9H5L9 145 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 C16orf95Q9H693 158 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 PLSCR3Q9NRY6 295 aa8.37□□□□□ -1.07
RPAIN-204ENST00000405578 FAM240BA0A1B0GVZ2 78 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 SLC25A17O43808 307 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 RAMP3O60896 148 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 NDUFB6O95139 128 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 HLA-DRB1P01911 266 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 AKR1C4P17516 323 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 LPAR6P43657 344 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 CCR6P51684 374 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 DHODHQ02127 395 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 TRIM16LQ309B1 348 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 SLC35E3Q7Z769 313 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 PPP1R27Q86WC6 154 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 CENPSQ8N2Z9 138 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 DMBX1Q8NFW5 382 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 MRGPRFQ96AM1 343 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 RHOVQ96L33 236 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 RTBDNQ9BSG5 229 aaPredicted RBP8.36□□□□□ -1.07
RPAIN-204ENST00000405578 GON7Q9BXV9 100 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 FBXL15Q9H469 300 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 NAA60Q9H7X0 242 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 VSIG4Q9Y279 399 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 SIGLEC9Q9Y336 463 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 COL7A1Q02388 2944 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 TENM3Q9P273 2699 aa8.36□□□□□ -1.07
RPAIN-204ENST00000405578 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 AP4M1O00189 453 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 PLA2G10O15496 165 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 OR2A4O95047 310 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 CNIH1O95406 144 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 AMY1AP04745 511 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 CNTFRP26992 372 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 UBE2MP61081 183 aaKnown RBP8.35□□□□□ -1.07
RPAIN-204ENST00000405578 SRPXP78539 464 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 ASAH1Q13510 395 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 TMEM128Q5BJH2 165 aa8.35□□□□□ -1.07
RPAIN-204ENST00000405578 KPRPQ5T749 579 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms