RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 A0A1B0GU03 582 aa3□□□□□ -1.93
RTN4-208ENST00000404909 LEUTXA8MZ59 168 aa3□□□□□ -1.93
RTN4-208ENST00000404909 B4DSR2 109 aa3□□□□□ -1.93
RTN4-208ENST00000404909 H0YJW9 148 aa3□□□□□ -1.93
RTN4-208ENST00000404909 L7N2F9 121 aa3□□□□□ -1.93
RTN4-208ENST00000404909 GAPDHP04406 335 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 CXCL2P19875 107 aa3□□□□□ -1.93
RTN4-208ENST00000404909 CD24P25063 80 aa3□□□□□ -1.93
RTN4-208ENST00000404909 IL15RAQ13261 267 aa3□□□□□ -1.93
RTN4-208ENST00000404909 HNF4GQ14541 408 aa3□□□□□ -1.93
RTN4-208ENST00000404909 LGALSLQ3ZCW2 172 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 LDLRAD2Q5SZI1 272 aa3□□□□□ -1.93
RTN4-208ENST00000404909 LAMTOR1Q6IAA8 161 aa3□□□□□ -1.93
RTN4-208ENST00000404909 HCP5Q6MZN7 132 aa3□□□□□ -1.93
RTN4-208ENST00000404909 KIR3DL3Q8N743 410 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OR11H6Q8NGC7 330 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OR4D5Q8NGN0 318 aa3□□□□□ -1.93
RTN4-208ENST00000404909 C17orf50Q8WW18 174 aa3□□□□□ -1.93
RTN4-208ENST00000404909 LSM10Q969L4 123 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 FLYWCH2Q96CP2 140 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 HARBI1Q96MB7 349 aa3□□□□□ -1.93
RTN4-208ENST00000404909 TBX15Q96SF7 602 aa3□□□□□ -1.93
RTN4-208ENST00000404909 NABP2Q9BQ15 211 aa3□□□□□ -1.93
RTN4-208ENST00000404909 RNF126Q9BV68 326 aa3□□□□□ -1.93
RTN4-208ENST00000404909 REG4Q9BYZ8 158 aa3□□□□□ -1.93
RTN4-208ENST00000404909 ARL6Q9H0F7 186 aa3□□□□□ -1.93
RTN4-208ENST00000404909 C7orf69Q9H7B7 122 aa3□□□□□ -1.93
RTN4-208ENST00000404909 TMEM140Q9NV12 185 aa3□□□□□ -1.93
RTN4-208ENST00000404909 DPM3Q9P2X0 92 aa3□□□□□ -1.93
RTN4-208ENST00000404909 MMP24Q9Y5R2 645 aa3□□□□□ -1.93
RTN4-208ENST00000404909 TRAV3A0A0B4J244 114 aa3□□□□□ -1.93
RTN4-208ENST00000404909 SRRM4A7MD48 611 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 K7EPK0 472 aa3□□□□□ -1.93
RTN4-208ENST00000404909 RBFOX2O43251 390 aaKnown RBP eCLIP3□□□□□ -1.932e-9■■■■□ 21
RTN4-208ENST00000404909 OR2F2O95006 317 aa3□□□□□ -1.93
RTN4-208ENST00000404909 HRASP01112 189 aa3□□□□□ -1.93
RTN4-208ENST00000404909 TGFAP01135 160 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OR9G9P0C7N8 305 aa3□□□□□ -1.93
RTN4-208ENST00000404909 MMP9P14780 707 aa3□□□□□ -1.93
RTN4-208ENST00000404909 NUP62P37198 522 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 CEACAM3P40198 252 aa3□□□□□ -1.93
RTN4-208ENST00000404909 CAV2P51636 162 aa3□□□□□ -1.93
RTN4-208ENST00000404909 LRRC75A-AS1Q8N1F1 130 aa3□□□□□ -1.93
RTN4-208ENST00000404909 FAM71E2Q8N5Q1 922 aa3□□□□□ -1.93
RTN4-208ENST00000404909 WFDC11Q8NEX6 87 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OR5AN1Q8NGI8 311 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OR4A16Q8NH70 328 aa3□□□□□ -1.93
RTN4-208ENST00000404909 PAIP2BQ9ULR5 123 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 RCL1Q9Y2P8 373 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 WASHC3Q9Y3C0 194 aa3□□□□□ -1.93
RTN4-208ENST00000404909 AUP1Q9Y679 476 aa3□□□□□ -1.93
RTN4-208ENST00000404909 TRAV40A0A0B4J280 105 aa3□□□□□ -1.93
RTN4-208ENST00000404909 H3BP45 60 aa3□□□□□ -1.93
RTN4-208ENST00000404909 TIMM23O14925 209 aa3□□□□□ -1.93
RTN4-208ENST00000404909 CHST1O43916 411 aa3□□□□□ -1.93
RTN4-208ENST00000404909 DEDDO75618 318 aa3□□□□□ -1.93
RTN4-208ENST00000404909 IFNA17P01571 189 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OPN1MWP04001 364 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OPN1MW2P0DN77 364 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OPN1MW3P0DN78 364 aa3□□□□□ -1.93
RTN4-208ENST00000404909 IAPPP10997 89 aa3□□□□□ -1.93
RTN4-208ENST00000404909 RAB13P51153 203 aa3□□□□□ -1.93
RTN4-208ENST00000404909 ZNF137PP52743 207 aa3□□□□□ -1.93
RTN4-208ENST00000404909 VAMP2P63027 116 aa3□□□□□ -1.93
RTN4-208ENST00000404909 HES1Q14469 280 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OR4A47Q6IF82 309 aa3□□□□□ -1.93
RTN4-208ENST00000404909 PRSS54Q6PEW0 395 aa3□□□□□ -1.93
RTN4-208ENST00000404909 CLEC9AQ6UXN8 241 aa3□□□□□ -1.93
RTN4-208ENST00000404909 BRD3OSQ6XYD6 125 aa3□□□□□ -1.93
RTN4-208ENST00000404909 OR4C13Q8NGP0 309 aa3□□□□□ -1.93
RTN4-208ENST00000404909 RITA1Q96K30 269 aa3□□□□□ -1.93
RTN4-208ENST00000404909 HINT2Q9BX68 163 aa3□□□□□ -1.93
RTN4-208ENST00000404909 UNKLQ9H9P5 680 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 CTNNBIP1Q9NSA3 81 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 FAM212BQ9NTI7 297 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 POMT1Q9Y6A1 747 aa3□□□□□ -1.93
RTN4-208ENST00000404909 MSGN1A6NI15 193 aa3□□□□□ -1.93
RTN4-208ENST00000404909 HMSDA8MTL9 139 aa3□□□□□ -1.93
RTN4-208ENST00000404909 ODF3BA8MYP8 253 aa3□□□□□ -1.93
RTN4-208ENST00000404909 SMAD7O15105 426 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 SNAPC5O75971 98 aa3□□□□□ -1.93
RTN4-208ENST00000404909 SAA1P0DJI8 122 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 SLC25A4P12235 298 aa3□□□□□ -1.93
RTN4-208ENST00000404909 PVALBP20472 110 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 MC5RP33032 325 aa3□□□□□ -1.93
RTN4-208ENST00000404909 SAA4P35542 130 aa3□□□□□ -1.93
RTN4-208ENST00000404909 UBE2E1P51965 193 aa3□□□□□ -1.93
RTN4-208ENST00000404909 PAX8Q06710 450 aa3□□□□□ -1.93
RTN4-208ENST00000404909 TPTE2P1Q5T6R2 138 aa3□□□□□ -1.93
RTN4-208ENST00000404909 RUSC1-AS1Q66K80 236 aa3□□□□□ -1.93
RTN4-208ENST00000404909 DHRS7BQ6IAN0 325 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 FAM71F2Q6NXP2 309 aa3□□□□□ -1.93
RTN4-208ENST00000404909 PDPNQ86YL7 162 aa3□□□□□ -1.93
RTN4-208ENST00000404909 LINC01356Q8N9X3 169 aa3□□□□□ -1.93
RTN4-208ENST00000404909 QTRT1Q9BXR0 403 aaKnown RBP3□□□□□ -1.93
RTN4-208ENST00000404909 MS4A7Q9GZW8 240 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 ZFP57Q9NU63 452 aa3□□□□□ -1.93
RTN4-208ENST00000404909 ITGB1BP2Q9UKP3 347 aa3□□□□□ -1.93
RTN4-208ENST00000404909 NUP50Q9UKX7 468 aa3□□□□□ -1.93
RTN4-208ENST00000404909 TNFSF18Q9UNG2 199 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms