RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 HLA-DQB1P01920 261 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 TRGV3P03979 118 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 CTXN2P0C2S0 81 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 SMIM18P0DKX4 95 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 AADACP22760 399 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 FCGR2CP31995 323 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 LGALS7P47929 136 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 SLURP1P55000 103 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 SCAND1P57086 179 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 TPPP2P59282 170 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 ARPC4P59998 168 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 VBP1P61758 197 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 NCS1P62166 190 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF616Q08AN1 781 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 TMEM267Q0VDI3 215 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 CBX3Q13185 183 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 RTL8BQ17RB0 113 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 TIMM50Q3ZCQ8 353 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 DEFB121Q5J5C9 76 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 C10orf55Q5SWW7 151 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF562Q6V9R5 426 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 KCTD9Q7L273 389 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 HOGA1Q86XE5 327 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 VKORC1L1Q8N0U8 176 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF645Q8N7E2 425 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 SAMD12Q8N8I0 201 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR5M8Q8NGP6 311 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 DCUN1D4Q92564 292 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 DPF1Q92782 380 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 SNAPC3Q92966 411 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 UBE2E2Q96LR5 201 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 MCRIP2Q9BUT9 160 aaKnown RBP4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 FUNDC2Q9BWH2 189 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 NAA50Q9GZZ1 169 aaKnown RBP4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 DIABLOQ9NR28 239 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 CCL28Q9NRJ3 127 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF355PQ9NSJ1 428 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 TAS2R8Q9NYW2 309 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 RBMX2Q9Y388 322 aaKnown RBP4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 A0A0A6YYH2 397 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 A6NJ64 397 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 H3BS24 57 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 RBMXL2O75526 392 aaKnown RBP4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 EIF4EP06730 217 aaKnown RBP4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 LGALS1P09382 135 aaKnown RBP4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR8U8P0C7N1 319 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 SAA1P0DJI8 122 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 RRASP10301 218 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 BRWD1-AS2P59051 145 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 TAS2R20P59543 309 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 FXYD4P59646 89 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 UBE2KP61086 200 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 DGCR2P98153 550 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 RUNX1Q01196 453 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 EIF4EBP1Q13541 118 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 TNXAQ16473 311 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 PRSS8Q16651 343 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 VMA21Q3ZAQ7 101 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 AKIRIN2Q53H80 203 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 UBE2NLQ5JXB2 153 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 TMEM69Q5SWH9 247 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 C9orf66Q5T8R8 295 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 C19orf35Q6ZS72 473 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 SSX9Q7RTT3 188 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 TCTEX1D1Q8N7M0 179 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 POC5Q8NA72 575 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR13F1Q8NGS4 319 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 SECTM1Q8WVN6 248 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 TCTEX1D2Q8WW35 142 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 ACOT12Q8WYK0 555 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 DLX4Q92988 240 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 SLC25A46Q96AG3 418 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 S100A16Q96FQ6 103 aaKnown RBP4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 ADTRPQ96IZ2 230 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 PRR25Q96S07 402 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 DCUN1D5Q9BTE7 237 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 GPR61Q9BZJ8 451 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF430Q9H8G1 570 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 COMMD3Q9UBI1 195 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 SCOCQ9UIL1 159 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 NBEAL2Q6ZNJ1 2754 aa4.45□□□□□ -1.7
HMGB1P20-201ENST00000402555 ANKRD34BA5PLL1 514 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 MSGN1A6NI15 193 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 LINC01619G3V211 115 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 OVOL1O14753 267 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 XRCC3O43542 346 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 SAP30O75446 220 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 PPYP01298 95 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 PMP2P02689 132 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 PRH1P02810 166 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 MYOD1P15172 320 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 CD40LGP29965 261 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 ECI1P42126 302 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 RFX2P48378 723 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 CDK10Q15131 360 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 RNASE12Q5GAN4 147 aaKnown RBP4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 PYHIN1Q6K0P9 492 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 C11orf87Q6NUJ2 197 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 OVCH2Q7RTZ1 564 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms