RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 HRKO00198 91 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 RBMY1A1P0DJD3 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 RBMY1CP0DJD4 496 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 KLF9Q13886 244 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 GFI1BQ5VTD9 330 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF562Q6V9R5 426 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 TMEM229BQ8NBD8 167 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 TMEM106BQ9NUM4 274 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 CYSLTR1Q9Y271 337 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF250P15622 560 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 SLC25A1P53007 311 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 WDFY1Q8IWB7 410 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 MMP26Q9NRE1 261 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 J3QW42 95 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 MGST3O14880 152 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 KLF4O43474 513 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 PITX3O75364 302 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 IGKV1D-33P01593 117 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 IGKV1-33P01594 117 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 HIST1H1BP16401 226 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 C9orf40Q8IXQ3 194 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 SLC22A18ASQ8N1D0 253 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 CBLN4Q9NTU7 201 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 COL5A3P25940 1745 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 SHANK3Q9BYB0 1731 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 LOC390937A0A1W2PQ73 354 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 NDUFA3O95167 84 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 CKS2P33552 79 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 LSM6P62312 80 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 RNF133Q8WVZ7 376 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 GALNT14Q96FL9 552 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 TTC3P53804 2025 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 TMEM8BA6NDV4 472 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 SOD3P08294 240 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 ZMAT4Q9H898 229 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 A0A1W2PQD3 144 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 CFDP00746 253 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 HBBP68871 147 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 MMD2Q8IY49 270 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 COX14Q96I36 57 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 A0A0J9YW62 118 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 ZFPL1O95159 310 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 ANOS1P23352 680 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 MPV17LQ2QL34 196 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 C18orf15Q96N68 181 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 PRSS27Q9BQR3 290 aa9.43□□□□□ -0.9
CACNA1C-216ENST00000399638 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 APOMO95445 188 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 CEACAM8P31997 349 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 PPP1R27Q86WC6 154 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 NRTNQ99748 197 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 NUP205Q92621 2012 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 DSPPQ9NZW4 1301 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 PQLC2LA1A4F0 135 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 MBNL2Q5VZF2 373 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 TRAV8-2A0A0B4J237 113 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 PSG9Q00887 426 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 FAM216AQ8WUB2 273 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF703Q9H7S9 590 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 TRAV8-6A0A0B4J262 113 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 INS-IGF2F8WCM5 200 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 INSP01308 110 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 DEGS2Q6QHC5 323 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 CLEC19AQ6UXS0 136 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 GAPTQ8N292 157 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 NEU3Q9UQ49 428 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 ANKRD20A5PA0PJZ0 165 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 RND2P52198 227 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 C11orf87Q6NUJ2 197 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 CCL28Q9NRJ3 127 aa9.42□□□□□ -0.9
CACNA1C-216ENST00000399638 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 PTHLHP12272 177 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 GLRXP35754 106 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 MPV17P39210 176 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 CDKN2AP42771 156 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 DNM1P46Q6ZS02 220 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 LINC00596Q86U02 117 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 SP7Q8TDD2 431 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 ST6GALNAC6Q969X2 333 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 MRGPRFQ96AM1 343 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 MARS2Q96GW9 593 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 CST9LQ9H4G1 147 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 CLEC18BQ6UXF7 455 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 SDHCQ99643 169 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 JKAMPQ9P055 326 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 MTFP1Q9UDX5 166 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 SHROOM3Q8TF72 1996 aa9.41□□□□□ -0.9
CACNA1C-216ENST00000399638 TCRBV16S1A1N1A0A5B0 115 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms