RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 IGLV3-16A0A075B6K0 115 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 FAM74A7A6NL05 159 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 UPK3AO75631 287 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF345Q14585 488 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 ADAD2Q8NCV1 583 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 ALG14Q96F25 216 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 CALYQ9NYX4 217 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF385AQ96PM9 386 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 ALKBH7Q9BT30 221 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 SH3BGRL3Q9H299 93 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 S4R3C0 116 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 LY75O60449 1722 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 GATA4P43694 442 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 HRKO00198 91 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 RBMY1A1P0DJD3 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 RBMY1CP0DJD4 496 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 KLF9Q13886 244 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 GFI1BQ5VTD9 330 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF562Q6V9R5 426 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 TMEM106BQ9NUM4 274 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 CYSLTR1Q9Y271 337 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF250P15622 560 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
CACNA1C-210ENST00000399606 J3QW42 95 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 MGST3O14880 152 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 KLF4O43474 513 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 PITX3O75364 302 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 IGKV1D-33P01593 117 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 IGKV1-33P01594 117 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 C9orf40Q8IXQ3 194 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 SLC22A18ASQ8N1D0 253 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 CBLN4Q9NTU7 201 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 COL5A3P25940 1745 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 SHANK3Q9BYB0 1731 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 LOC390937A0A1W2PQ73 354 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 H3BQ15 152 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 NDUFA3O95167 84 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 CKS2P33552 79 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 LSM6P62312 80 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 RNF133Q8WVZ7 376 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 GALNT14Q96FL9 552 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 TTC3P53804 2025 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 ANKRD20A5PA0PJZ0 165 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 TMEM8BA6NDV4 472 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 SOD3P08294 240 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 TEPPQ6URK8 271 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 ZMAT4Q9H898 229 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 TMEM30AQ9NV96 361 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 A0A1W2PQD3 144 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 CFDP00746 253 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 HBBP68871 147 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 MMD2Q8IY49 270 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 LSM10Q969L4 123 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 COX14Q96I36 57 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 A0A0J9YW62 118 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 ANOS1P23352 680 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 GVQW1Q8N7I0 195 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 C18orf15Q96N68 181 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 PRSS27Q9BQR3 290 aa9.43□□□□□ -0.9
CACNA1C-210ENST00000399606 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 APOMO95445 188 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 CEACAM8P31997 349 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 PPP1R27Q86WC6 154 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 NRTNQ99748 197 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 NUP205Q92621 2012 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 DSPPQ9NZW4 1301 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 PQLC2LA1A4F0 135 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 MBNL2Q5VZF2 373 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 TRAV8-2A0A0B4J237 113 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 PSG9Q00887 426 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 CLEC18BQ6UXF7 455 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 FAM216AQ8WUB2 273 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF703Q9H7S9 590 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 TRAV8-6A0A0B4J262 113 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 INS-IGF2F8WCM5 200 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 INSP01308 110 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 EWSR1Q01844 656 aaKnown RBP eCLIP9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 CLEC19AQ6UXS0 136 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 GAPTQ8N292 157 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 NEU3Q9UQ49 428 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 RND2P52198 227 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 CCL28Q9NRJ3 127 aa9.42□□□□□ -0.9
CACNA1C-210ENST00000399606 GLRXP35754 106 aa9.41□□□□□ -0.9
CACNA1C-210ENST00000399606 MPV17P39210 176 aa9.41□□□□□ -0.9
CACNA1C-210ENST00000399606 CDKN2AP42771 156 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-210ENST00000399606 PLPPR5Q32ZL2 321 aa9.41□□□□□ -0.9
CACNA1C-210ENST00000399606 DNM1P46Q6ZS02 220 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms