RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SRSF12Q8WXF0 261 aaKnown RBP11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 SNAPC3Q92966 411 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 SLC25A46Q96AG3 418 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 B9D2Q9BPU9 175 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 TINAGL1Q9GZM7 467 aaPredicted RBP11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 ZNF355PQ9NSJ1 428 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 SORL1Q92673 2214 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 C13orf42A0A1B0GVH6 325 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 PPYP01298 95 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 FCGR2CP31995 323 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 ECI1P42126 302 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 ACSM6Q6P461 480 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 MFSD4AQ8N468 514 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 SAMD12Q8N8I0 201 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 ZBTB34Q8NCN2 500 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 OR5AP2Q8NGF4 316 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 VSTM2AQ8TAG5 236 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 TCTEX1D2Q8WW35 142 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 GIMAP1Q8WWP7 306 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 ACOT12Q8WYK0 555 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 PHB2Q99623 299 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 DCUN1D5Q9BTE7 237 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 FUNDC2Q9BWH2 189 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 ZNF430Q9H8G1 570 aaPredicted RBP11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 RANGRFQ9HD47 186 aaPredicted RBP11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 ANAPC10Q9UM13 185 aa11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 ZNF256Q9Y2P7 627 aaPredicted RBP11.46□□□□□ -0.57
SMIM11A-203ENST00000399299 MSGN1A6NI15 193 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 ACTL6BO94805 426 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 PTHLHP12272 177 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 KIR2DS2P43631 304 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 BRWD1-AS2P59051 145 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 CD69Q07108 199 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 OR2B11Q5JQS5 317 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 TMEM69Q5SWH9 247 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 ADAD2Q8NCV1 583 aaKnown RBP11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 SECTM1Q8WVN6 248 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 USMG5Q96IX5 58 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 PRR25Q96S07 402 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 SPIN2AQ99865 258 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 SPIN2BQ9BPZ2 258 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 IFT46Q9NQC8 304 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 COA4Q9NYJ1 87 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 TAS2R8Q9NYW2 309 aa11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 LSM4Q9Y4Z0 139 aaKnown RBP11.45□□□□□ -0.58
SMIM11A-203ENST00000399299 RBFOX2O43251 390 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 SAP30O75446 220 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 KBTBD11O94819 623 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 ZP3P21754 424 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 TAS2R20P59543 309 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 PUSL1Q8N0Z8 303 aaKnown RBP11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 TMEM167AQ8TBQ9 72 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 CMTM3Q96MX0 182 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 SLC5A7Q9GZV3 580 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 CCL28Q9NRJ3 127 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 DNAH9Q9NYC9 4486 aa11.44□□□□□ -0.58
SMIM11A-203ENST00000399299 TENM3Q9P273 2699 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 MPPED1O15442 326 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 OR2A4O95047 310 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 HRASP01112 189 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 NAT1P18440 290 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 MAS1LP35410 378 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 NCS1P62166 190 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 CATR1Q13166 79 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 DYRK1AQ13627 763 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 ZNF343Q6P1L6 599 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 BORCS5Q969J3 196 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 OR2A7Q96R45 310 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 AIFM2Q9BRQ8 373 aa11.43□□□□□ -0.58
SMIM11A-203ENST00000399299 MEIS3P1A6NDR6 274 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 FAM223BA6NKX1 122 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 APOA1P02647 267 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 FCER2P06734 321 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 APELAP0DMC3 54 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 PRSS3P35030 304 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 TAS2R46P59540 309 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 VBP1P61758 197 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 SLC25A42Q86VD7 318 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 FAM223AQ8IWN6 122 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 VKORC1L1Q8N0U8 176 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 TTC9CQ8N5M4 171 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 OR6Q1Q8NGQ2 317 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 GPHA2Q96T91 129 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 ELOVL1Q9BW60 279 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 EHFQ9NZC4 300 aa11.42□□□□□ -0.58
SMIM11A-203ENST00000399299 STAB2Q8WWQ8 2551 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 TRBV9A0A0B4J1U6 114 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 TNFSF12O43508 249 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 EIF4EP06730 217 aaKnown RBP11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 SMIM18P0DKX4 95 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 FXYD4P59646 89 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 HERV-K104P61576 105 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 POU2AF1Q16633 256 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 DHRS11Q6UWP2 260 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 ZNF818PQ6ZRF7 136 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 TMEM17Q86X19 198 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 SPAG16Q8N0X2 631 aa11.41□□□□□ -0.58
SMIM11A-203ENST00000399299 OR4C12Q96R67 309 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms