RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 ELOA3CA0A087WX78 387 aaPredicted RBP9.78□□□□□ -0.84
COL25A1-202ENST00000399127 TRGV8A0A0C4DH27 118 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 C16orf97H3BN30 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BKO60814 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 CLDN1O95832 211 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 IGHV1-46P01743 117 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BJP06899 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 WNT2P09544 360 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BOP23527 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BBP33778 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 MAS1LP35410 378 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BDP58876 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 SELENOVP59797 346 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 RPL23AP62750 156 aaKnown RBP9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BCP62807 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 CCL8P80075 99 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 KLRB1Q12918 225 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST2H2BEQ16778 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BHQ93079 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 LEAP2Q969E1 77 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BNQ99877 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 HIST1H2BMQ99879 126 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 FAM234AQ9H0X4 552 aa9.78□□□□□ -0.84
COL25A1-202ENST00000399127 PIEZO1Q92508 2521 aa9.77□□□□□ -0.84
COL25A1-202ENST00000399127 SMCO3A2RU48 225 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.85
COL25A1-202ENST00000399127 SLC25A6P12236 298 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 RPS23P62266 143 aaKnown RBP9.77□□□□□ -0.85
COL25A1-202ENST00000399127 BSPH1Q075Z2 132 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 LY6DQ14210 128 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 MRGPRGQ86SM5 289 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 AGMATQ9BSE5 352 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 PSENENQ9NZ42 101 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 MGST3O14880 152 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 TCF21O43680 179 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 LHBP01229 141 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 MMP9P14780 707 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 BAXQ07812 192 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 ARL16Q0P5N6 197 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 EIF4EBP1Q13541 118 aaPredicted RBP9.77□□□□□ -0.85
COL25A1-202ENST00000399127 SPINK9Q5DT21 86 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 SPANXN5Q5MJ07 72 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 TMEM108Q6UXF1 575 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 LYPD6BQ8NI32 183 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 RBMXL1Q96E39 390 aaKnown RBP9.77□□□□□ -0.85
COL25A1-202ENST00000399127 SNX22Q96L94 193 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 RAB40CQ96S21 281 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 EIF5A2Q9GZV4 153 aaKnown RBP9.77□□□□□ -0.85
COL25A1-202ENST00000399127 FBXO7Q9Y3I1 522 aa9.77□□□□□ -0.85
COL25A1-202ENST00000399127 TACC2O95359 2948 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 DPRXA6NFQ7 191 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 K7N7A8 449 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 SNCAP37840 140 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 CATR1Q13166 79 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 JOSD1Q15040 202 aaPredicted RBP9.76□□□□□ -0.85
COL25A1-202ENST00000399127 C3orf36Q3SXR2 165 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 SLC25A24Q6NUK1 477 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 FAM90A1Q86YD7 464 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 ATP5SQ99766 215 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 CBLN4Q9NTU7 201 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 ZNF835Q9Y2P0 537 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 MMP24Q9Y5R2 645 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 WSB1Q9Y6I7 421 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 TPRP12270 2363 aaKnown RBP9.76□□□□□ -0.85
COL25A1-202ENST00000399127 RAI1Q7Z5J4 1906 aaPredicted RBP9.76□□□□□ -0.85
COL25A1-202ENST00000399127 RBMXL2O75526 392 aaKnown RBP9.76□□□□□ -0.85
COL25A1-202ENST00000399127 THBDP07204 575 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 GZMBP10144 247 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 CFHR2P36980 270 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 CDKN1BP46527 198 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 ZNF134P52741 427 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 DVL1P1P54792 670 aaPredicted RBP9.76□□□□□ -0.85
COL25A1-202ENST00000399127 UBE2KP61086 200 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 RPS16P62249 146 aaKnown RBP9.76□□□□□ -0.85
COL25A1-202ENST00000399127 ZNF674Q2M3X9 581 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 ZBTB34Q8NCN2 500 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 RNF7Q9UBF6 113 aa9.76□□□□□ -0.85
COL25A1-202ENST00000399127 DYSFO75923 2080 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 PIGBOS1A0A0B4J2F0 54 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 A0A1W2PPQ1 181 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 M0QZK8 103 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 PROP1O75360 226 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 GYPAP02724 150 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 OR4A8P0C604 315 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 GPR12P47775 334 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 CCL20P78556 96 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 GUK1Q16774 197 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 RPL39P5Q59GN2 51 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 NCR3LG1Q68D85 454 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 HAPLN4Q86UW8 402 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 FAM216BQ8N7L0 139 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 DIRC2Q96SL1 478 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 CCL13Q99616 98 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 RBKSQ9H477 322 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 CLN8Q9UBY8 286 aa9.75□□□□□ -0.85
COL25A1-202ENST00000399127 DCHS2Q6V1P9 2916 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms