RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 MSMO1Q15800 293 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 NCR3LG1Q68D85 454 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 TAF15Q92804 592 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 PSMG3Q9BT73 122 aaPredicted RBP15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 PTPRBP23467 1997 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 TRAV1-1A0A0B4J248 108 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RAB11AP62491 216 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 VHLLQ6RSH7 139 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZADH2Q8N4Q0 377 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 AGMATQ9BSE5 352 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZFHX2Q9C0A1 2572 aaPredicted RBP15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 IGKV1D-17A0A075B6S4 117 aa15.27■□□□□ 0.04
CHRFAM7A-202ENST00000397827 M0R1B8 84 aa15.27■□□□□ 0.04
CHRFAM7A-202ENST00000397827 TMEM183AQ8IXX5 376 aa15.27■□□□□ 0.04
CHRFAM7A-202ENST00000397827 NIPSNAP3BQ9BS92 247 aa15.27■□□□□ 0.04
CHRFAM7A-202ENST00000397827 A0A087WWC5 75 aa15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 C15orf65H3BRN8 121 aa15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TGOLN2O43493 480 aa15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MDKP21741 143 aaPredicted RBP15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TUBG1P23258 451 aa15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 RPL29P47914 159 aaKnown RBP15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ETFRF1Q6IPR1 90 aa15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 DIRC2Q96SL1 478 aa15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TUBG2Q9NRH3 451 aa15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ATMQ13315 3056 aa15.27■□□□□ 0.03
CHRFAM7A-202ENST00000397827 PLCE1Q9P212 2302 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ZNF737O75373 536 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 IGKV1D-33P01593 117 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 IGKV1-33P01594 117 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ERVFC1-1P60608 527 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 SERF2P84101 59 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 H2BFWTQ7Z2G1 175 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 GVINP1Q7Z2Y8 2422 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MBD3L4A6NDZ8 208 aaPredicted RBP15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MBD3L3A6NE82 208 aaPredicted RBP15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MBD3L5A6NJ08 208 aaPredicted RBP15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 HMGB3O15347 200 aaKnown RBP15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 SPINT2O43291 252 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TCF21O43680 179 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 CEACAM4O75871 244 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 BCL2P10415 239 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 PAX5Q02548 391 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TEX38Q6PEX7 206 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ZNF474Q6S9Z5 364 aaPredicted RBP15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ZNRF1Q8ND25 227 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MBD3L2Q8NHZ7 208 aaPredicted RBP15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MBD3L1Q8WWY6 194 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TVP23CQ96ET8 276 aa15.26■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TLE1Q04724 770 aa15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TMEM41BQ5BJD5 291 aa15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ZNF891A8MT65 544 aaPredicted RBP15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 PROP1O75360 226 aa15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 CLDN14O95500 239 aa15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 GCGP01275 180 aa15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 RPP25LQ8N5L8 163 aaKnown RBP15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 GCSAMQ8N6F7 178 aa15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 OR2V2Q96R30 315 aa15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 FAM234AQ9H0X4 552 aa15.25■□□□□ 0.03
CHRFAM7A-202ENST00000397827 SRRM5B3KS81 715 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 FAM90A2PQ658T7 463 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 GNG12Q9UBI6 72 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MAP1LC3B2A6NCE7 125 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 FAM201AQ5SY85 155 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MOGAT3Q86VF5 341 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 MAP1LC3BQ9GZQ8 125 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 CISD1Q9NZ45 108 aaKnown RBP15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 FAM215AQ9Y5M1 114 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 PMS2P5A8MQ11 134 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 SPRY3O43610 288 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ACSM6Q6P461 480 aa15.24■□□□□ 0.03
CHRFAM7A-202ENST00000397827 CEBPZOSA8MTT3 80 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 K7EM74 188 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 RAB29O14966 203 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 SPTBN2O15020 2390 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 HCFC1P51610 2035 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 EDDM3BP56851 147 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ZNF66Q6ZN08 573 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ZNF705AQ6ZN79 300 aaPredicted RBP15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 C1orf87Q8N0U7 546 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 HSD17B10Q99714 261 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 FCGR3BO75015 233 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 GPR12P47775 334 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 HTD2P86397 168 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 OR10P1Q8NGE3 313 aa15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 PINX1Q96BK5 328 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-202ENST00000397827 ADH4P08319 380 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 RBX1P62877 108 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 TFF3Q07654 80 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 UTF1Q5T230 341 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 LHX4Q969G2 390 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 QTRT1Q9BXR0 403 aaKnown RBP15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 PARD6GQ9BYG4 376 aaPredicted RBP15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 SLC25A22Q9H936 323 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 SLC39A9Q9NUM3 307 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 M0QZK8 103 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 SIAH2O43255 324 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 GGCTO75223 188 aaKnown RBP15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 CRYAAP02489 173 aa15.22■□□□□ 0.03
CHRFAM7A-202ENST00000397827 OR9G9P0C7N8 305 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms