RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 OR10V1Q8NGI7 309 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 CABLES2Q9BTV7 478 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 AKIP1Q9NQ31 210 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 KLK11Q9UBX7 282 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 BET1O15155 118 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 IGLV1-51P01701 117 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 OR3A3P47888 321 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 TAS2R46P59540 309 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 IGSF11Q5DX21 431 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 ODF3L1Q8IXM7 274 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 MFSD4AQ8N468 514 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 OR5AP2Q8NGF4 316 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 OR10J5Q8NHC4 309 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 SNAPC3Q92966 411 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 SPATA25Q9BR10 227 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 GINS4Q9BRT9 223 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 THAP7Q9BT49 309 aaPredicted RBP12.35□□□□□ -0.43
CUX2-202ENST00000397643 MRPL20Q9BYC9 149 aaKnown RBP12.35□□□□□ -0.43
CUX2-202ENST00000397643 SRRQ9GZT4 340 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 TAS2R8Q9NYW2 309 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 SLC23A1Q9UHI7 598 aa12.35□□□□□ -0.43
CUX2-202ENST00000397643 TRBV6-7A0A0A0MS04 114 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 IGKV1-6A0A0C4DH72 117 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 A0A1W2PN81 502 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 NBR2O15453 112 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 YPEL1O60688 119 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 JTBO76095 146 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 NDUFA3O95167 84 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 HLA-DMAP28067 261 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 CHRNA7P36544 502 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 CEACAM6P40199 344 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 ZNF846Q147U1 533 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 CDK10Q15131 360 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 ECSCRQ19T08 205 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 ACTBL2Q562R1 376 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 TMEM229BQ8NBD8 167 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 NPBQ8NG41 125 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 OR5H2Q8NGV7 314 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 YPEL2Q96QA6 119 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 OR4C12Q96R67 309 aa12.34□□□□□ -0.43
CUX2-202ENST00000397643 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
CUX2-202ENST00000397643 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
CUX2-202ENST00000397643 RBMX2Q9Y388 322 aaKnown RBP12.34□□□□□ -0.43
CUX2-202ENST00000397643 PMP2P02689 132 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 TBPP20226 339 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 PPP1CCP36873 323 aaKnown RBP12.33□□□□□ -0.44
CUX2-202ENST00000397643 TAS2R19P59542 299 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 GNMTQ14749 295 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 HAGHQ16775 308 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 MORN2Q502X0 79 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 TRIQKQ629K1 86 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 LYSMD2Q8IV50 215 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 SGPP2Q8IWX5 399 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 NABP2Q9BQ15 211 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 ZNF251Q9BRH9 671 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 OR1A1Q9P1Q5 309 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 KIAA1456Q9P272 454 aa12.33□□□□□ -0.44
CUX2-202ENST00000397643 IGHV3-11P01762 117 aa12.32□□□□□ -0.44
CUX2-202ENST00000397643 HSPB1P04792 205 aaKnown RBP12.32□□□□□ -0.44
CUX2-202ENST00000397643 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
CUX2-202ENST00000397643 INPP1P49441 399 aa12.32□□□□□ -0.44
CUX2-202ENST00000397643 PPP5CP53041 499 aa12.32□□□□□ -0.44
CUX2-202ENST00000397643 AP3S2P59780 193 aa12.32□□□□□ -0.44
CUX2-202ENST00000397643 LIN54Q6MZP7 749 aa12.32□□□□□ -0.44
CUX2-202ENST00000397643 OR2AK2Q8NG84 335 aa12.32□□□□□ -0.44
CUX2-202ENST00000397643 EDARADDQ8WWZ3 215 aa12.32□□□□□ -0.44
CUX2-202ENST00000397643 EHFQ9NZC4 300 aa12.32□□□□□ -0.44
CUX2-202ENST00000397643 ANKRD20A5PA0PJZ0 165 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 ITGB1BP1O14713 200 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 CD3DP04234 171 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 IFNA6P05013 189 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 CD40LGP29965 261 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 HRH1P35367 487 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 RNASE10Q5GAN6 216 aaKnown RBP12.31□□□□□ -0.44
CUX2-202ENST00000397643 STEAP1BQ6NZ63 245 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 ZNF833PQ6ZTB9 187 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 TOMM5Q8N4H5 51 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 TCTEX1D1Q8N7M0 179 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 ABHD14AQ9BUJ0 271 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 CCDC32Q9BV29 185 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 RDH8Q9NYR8 311 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 NUBP2Q9Y5Y2 271 aa12.31□□□□□ -0.44
CUX2-202ENST00000397643 RAB3DO95716 219 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 AKAIN1P0CW23 69 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 RFX2P48378 723 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 CX3CL1P78423 397 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 DYRK1AQ13627 763 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 MEF2DQ14814 521 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 BAK1Q16611 211 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 ZNF660Q6AZW8 331 aaPredicted RBP12.3□□□□□ -0.44
CUX2-202ENST00000397643 TMEM17Q86X19 198 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
CUX2-202ENST00000397643 GIMAP1Q8WWP7 306 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 TRIM63Q969Q1 353 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 FLYWCH2Q96CP2 140 aaKnown RBP12.3□□□□□ -0.44
CUX2-202ENST00000397643 RHOVQ96L33 236 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 TSC22D3Q99576 134 aa12.3□□□□□ -0.44
CUX2-202ENST00000397643 SDHCQ99643 169 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms