RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 C20orf24Q9BUV8 137 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 GNG13Q9P2W3 67 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 IGKV1D-8A0A087WSZ0 117 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 IGKV1D-33P01593 117 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 IGKV1-33P01594 117 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 CXorf66Q5JRM2 361 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 TRAF4Q9BUZ4 470 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 SERTAD4Q9NUC0 356 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 TCF19Q9Y242 345 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 KPTNQ9Y664 436 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 ANKRD11Q6UB99 2663 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 IGKV1D-13A0A0B4J2D9 117 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 RBFOX2O43251 390 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 DEDDO75618 318 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 IGKV1-13P0DP09 117 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 RPL7L1Q6DKI1 246 aaKnown RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 Q6ZS49 121 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF418Q8TF45 676 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 COQ2Q96H96 371 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 RBKSQ9H477 322 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 SLC45A2Q9UMX9 530 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 TIMM9Q9Y5J7 89 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 C17orf98A8MV24 154 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 CCKARP32238 428 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 ERVK11-1P61568 191 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF345Q14585 488 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 FXYD3Q14802 87 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 OR5R1Q8NH85 324 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 FAM210AQ96ND0 272 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 UBE2G1P62253 170 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF273Q14593 569 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 DAZAP2Q15038 168 aaPredicted RBP6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TEX261Q6UWH6 196 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 WDR86Q86TI4 376 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 VKORC1L1Q8N0U8 176 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TMEM252Q8N6L7 170 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 OR4F17Q8NGA8 305 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 OR4F5Q8NH21 305 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 OR10C1Q96KK4 312 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 OR4F4Q96R69 305 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 NIPSNAP3BQ9BS92 247 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 PLSCR3Q9NRY6 295 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TMA7Q9Y2S6 64 aaKnown RBP6.86□□□□□ -1.31
PTPRD-204ENST00000397606 IGHV2-26A0A0B4J1V2 119 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TRAV20A0A0B4J274 112 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 OOSP1A8MZH6 123 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 KRBOX1C9JBD0 128 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TRIM77I1YAP6 450 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 PF4V1P10720 104 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 HLA-GP17693 338 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TOR2AQ5JU69 321 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 LYPD2Q6UXB3 125 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 SPOCK3Q9BQ16 436 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 NPVFQ9HCQ7 196 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 HIF1ANQ9NWT6 349 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TNFSF18Q9UNG2 199 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 NPIPB11E5RHQ5 1161 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 SNAPINO95295 136 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF735P0CB33 412 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 LYZP61626 148 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 TEX36Q5VZQ5 186 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 C1orf147Q96MC9 270 aaPredicted RBP6.86□□□□□ -1.31
PTPRD-204ENST00000397606 PFDN5Q99471 154 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 NCOR1P1Q9H4R4 102 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 MED9Q9NWA0 146 aa6.86□□□□□ -1.31
PTPRD-204ENST00000397606 KIAA1324LA8MWY0 1029 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-204ENST00000397606 ORM2P19652 201 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 MINOS1Q5TGZ0 78 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 OR10G4Q8NGN3 311 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 OR10G9Q8NGN4 311 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 OR10G7Q8NGN6 311 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 OR4A5Q8NH83 315 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 MINOS1-NBL1R4GNA1 71 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 TRAV40A0A0B4J280 105 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 M0QZK8 103 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 KCNAB3O43448 404 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 CLEC3BP05452 202 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 SOD3P08294 240 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 CD1BP29016 333 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 CDC34P49427 236 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-204ENST00000397606 HCP5Q6MZN7 132 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 SVBPQ8N300 66 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 FBXL15Q9H469 300 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 MLXQ9UH92 298 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 SPG11Q96JI7 2443 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 A0A0U1RQK1 487 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF320A2RRD8 509 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 MPDU1O75352 247 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 ATF4P18848 351 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-204ENST00000397606 GATA3P23771 443 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 CYB5R2Q6BCY4 276 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 OR4A47Q6IF82 309 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 Q6ZSR3 168 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 COMMD1Q8N668 190 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 AAMDCQ9H7C9 122 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 TMEM56-RWDD3S4R434 201 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms