RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PAX2Q02962 417 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 MORN2Q502X0 79 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 MIDNQ504T8 468 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 BTNL3Q6UXE8 466 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 RNASE11Q8TAA1 199 aaKnown RBP12.17□□□□□ -0.46
CAPN3-207ENST00000397200 RNF150Q9ULK6 438 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 GAB2Q9UQC2 676 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 AKAP9Q99996 3911 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 IGHV3-43A0A0B4J1X8 118 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 TOR1AO14656 332 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 SMAD7O15105 426 aaKnown RBP12.16□□□□□ -0.46
CAPN3-207ENST00000397200 SYNGR2O43760 224 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 ATG12O94817 140 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 IGHV3-43DP0DP04 118 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 ZNF16P17020 682 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-207ENST00000397200 DYNLT3P51808 116 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 RPL23AP62750 156 aaKnown RBP12.16□□□□□ -0.46
CAPN3-207ENST00000397200 IZUMO4Q1ZYL8 232 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 C17orf58Q2M2W7 97 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 TMEM30BQ3MIR4 351 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 C10orf91Q5T1B1 145 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 Q6ZRG5 221 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 STRAPQ9Y3F4 350 aaKnown RBP12.16□□□□□ -0.46
CAPN3-207ENST00000397200 MYO9AB2RTY4 2548 aa12.16□□□□□ -0.46
CAPN3-207ENST00000397200 TRAV20A0A0B4J274 112 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 hCG_1809904A0A1W2PP81 198 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 A0A1W2PPE2 198 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 A0A1W2PR64 198 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 A0A1W2PRV1 198 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 TMEM218A2RU14 115 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 C17orf98A8MV24 154 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 ST8SIA5O15466 376 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 IGHV4-31P0DP07 118 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 SULT1A1P50225 295 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 ARF6P62330 175 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 CIARTQ8N365 385 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-207ENST00000397200 KIR3DL3Q8N743 410 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 OR5C1Q8NGR4 320 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 TCTEX1D2Q8WW35 142 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 SH3BGRL3Q9H299 93 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 IFI27L2Q9H2X8 130 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 HSPB7Q9UBY9 170 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 CACFD1Q9UGQ2 172 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 PSG11Q9UQ72 335 aa12.15□□□□□ -0.46
CAPN3-207ENST00000397200 LINC00473A8K010 186 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 TRIM77I1YAP6 450 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 M0R1W7 72 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 RAB29O14966 203 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 PROP1O75360 226 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 S1PR2O95136 353 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 NXPH3O95157 252 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 OMGP23515 440 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 DUTP33316 252 aaKnown RBP12.15□□□□□ -0.47
CAPN3-207ENST00000397200 DVL1P1P54792 670 aaPredicted RBP12.15□□□□□ -0.47
CAPN3-207ENST00000397200 DLX6P56179 175 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 LTC4SQ16873 150 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 Q3ZCU0 254 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 PRAMEF5Q5TYX0 476 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 HEPN1Q6WQI6 88 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 STX12Q86Y82 276 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 SPAG16Q8N0X2 631 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 ATP5SQ99766 215 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 IDI2-AS1Q9NZ38 188 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 INSIG2Q9Y5U4 225 aa12.15□□□□□ -0.47
CAPN3-207ENST00000397200 CREBBPQ92793 2442 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 RBFOX2O43251 390 aaKnown RBP eCLIP12.14□□□□□ -0.471e-6■■■■■ 32.4
CAPN3-207ENST00000397200 RBP4P02753 201 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 ATP6V0CP27449 155 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 CLINT1Q14677 625 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 AARDQ4LEZ3 155 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 CYB5R2Q6BCY4 276 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 COMMD1Q8N668 190 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 HSD17B11Q8NBQ5 300 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 OR10A7Q8NGE5 316 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 CD300LFQ8TDQ1 290 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 TMEM186Q96B77 213 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 HRH4Q9H3N8 390 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 HIF1ANQ9NWT6 349 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 GNG12Q9UBI6 72 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 CARHSP1Q9Y2V2 147 aaKnown RBP12.14□□□□□ -0.47
CAPN3-207ENST00000397200 KPTNQ9Y664 436 aa12.14□□□□□ -0.47
CAPN3-207ENST00000397200 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.13□□□□□ -0.476e-8■■■■□ 22
CAPN3-207ENST00000397200 WNK2Q9Y3S1 2297 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 SETXQ7Z333 2677 aaKnown RBP12.13□□□□□ -0.47
CAPN3-207ENST00000397200 MMP23AO75900 390 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 DFFBO76075 338 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 CST7O76096 145 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 TGFAP01135 160 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 ADCYAP1P18509 176 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 GPR12P47775 334 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 SRSF3P84103 164 aaKnown RBP12.13□□□□□ -0.47
CAPN3-207ENST00000397200 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 C11orf42Q8N5U0 333 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-207ENST00000397200 HIPK2Q9H2X6 1198 aa12.13□□□□□ -0.47
CAPN3-207ENST00000397200 FAM90A9PA6NNJ1 464 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms