RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 NECAP1Q8NC96 275 aa12.64□□□□□ -0.39
MCF2L-205ENST00000397017 COL8A2P25067 703 aa12.64□□□□□ -0.39
MCF2L-205ENST00000397017 PRRX1P54821 245 aa12.64□□□□□ -0.39
MCF2L-205ENST00000397017 OR10Z1Q8NGY1 313 aa12.64□□□□□ -0.39
MCF2L-205ENST00000397017 PHYHIPLQ96FC7 376 aa12.64□□□□□ -0.39
MCF2L-205ENST00000397017 AURKAIP1Q9NWT8 199 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-205ENST00000397017 WDFY3Q8IZQ1 3526 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 G3V3Q6 166 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 CCKARP32238 428 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 TAGLN2P37802 199 aaKnown RBP12.63□□□□□ -0.39
MCF2L-205ENST00000397017 STPG2Q8N412 459 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 ZBTB34Q8NCN2 500 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 LILRB1Q8NHL6 650 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-205ENST00000397017 MED9Q9NWA0 146 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 ARHGAP32A7KAX9 2087 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 SAA2-SAA4A0A096LPE2 208 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 LINC00862A6NCI5 91 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 CYB5BO43169 146 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 SAA2P0DJI9 122 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-205ENST00000397017 MYOD1P15172 320 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 MAP1LC3B2A6NCE7 125 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 MT-CO2P00403 227 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 PRB1P04280 392 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 NIPSNAP3BQ9BS92 247 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 MAP1LC3BQ9GZQ8 125 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 NBEAQ8NFP9 2946 aa12.63□□□□□ -0.39
MCF2L-205ENST00000397017 LINC00473A8K010 186 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 THBS3P49746 956 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 IL34Q6ZMJ4 242 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 TRAF4Q9BUZ4 470 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-205ENST00000397017 LYRM2Q9NU23 88 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-205ENST00000397017 SERTAD4Q9NUC0 356 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 OR51B2Q9Y5P1 312 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 ARG1P05089 322 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 TAS2R30P59541 319 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 C11orf53Q8IXP5 236 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 OR10G4Q8NGN3 311 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 OR10G9Q8NGN4 311 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 OR10G7Q8NGN6 311 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 C18orf12Q96KH6 178 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 NPY1RP25929 384 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 ZNF66Q6ZN08 573 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 MMP26Q9NRE1 261 aa12.62□□□□□ -0.39
MCF2L-205ENST00000397017 RPS10-NUDT3A0A1W2PQS6 291 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 NDUFS7O75251 213 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 S100A9P06702 114 aaKnown RBP12.61□□□□□ -0.39
MCF2L-205ENST00000397017 RPS10P46783 165 aaKnown RBP12.61□□□□□ -0.39
MCF2L-205ENST00000397017 PSMB3P49720 205 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 ZNF672Q499Z4 452 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-205ENST00000397017 MRPL20Q9BYC9 149 aaKnown RBP12.61□□□□□ -0.39
MCF2L-205ENST00000397017 UNKLQ9H9P5 680 aaKnown RBP12.61□□□□□ -0.39
MCF2L-205ENST00000397017 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-205ENST00000397017 CBLN2Q8IUK8 224 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 ISOC2Q96AB3 205 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 ZNF727A8MUV8 499 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 ERVK11-1P61568 191 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 RHEBQ15382 184 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 HMGN3Q15651 99 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 GUCA2BQ16661 112 aa12.61□□□□□ -0.39
MCF2L-205ENST00000397017 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-205ENST00000397017 ZNF729A6NN14 1252 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-205ENST00000397017 MMP23AO75900 390 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 IGKV1-5P01602 117 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 FBP1P09467 338 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 KRTAP27-1Q3LI81 207 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 RBMS3Q6XE24 437 aaKnown RBP12.6□□□□□ -0.39
MCF2L-205ENST00000397017 PERPQ96FX8 193 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 GNB4Q9HAV0 340 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 WSB1Q9Y6I7 421 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 S4R3C0 116 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 CEACAM18A8MTB9 384 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 IGFBPL1Q8WX77 278 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 ADTRPQ96IZ2 230 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 TMEM147Q9BVK8 224 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 TCF19Q9Y242 345 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 TRAV3A0A0B4J244 114 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 TMEM218A2RU14 115 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 RBP4P02753 201 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 FGF2P09038 288 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 HLA-GP17693 338 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 ORM2P19652 201 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 WFDC1Q9HC57 220 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 TMEM56-RWDD3S4R434 201 aa12.6□□□□□ -0.39
MCF2L-205ENST00000397017 DBX1A6NMT0 343 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 THBDP07204 575 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 ATP5J2P56134 94 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 TMEM178BH3BS89 294 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 HSPB1P04792 205 aaKnown RBP12.59□□□□□ -0.39
MCF2L-205ENST00000397017 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
MCF2L-205ENST00000397017 ACOT6Q3I5F7 207 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-205ENST00000397017 CT45A1Q5HYN5 189 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 CT45A3Q8NHU0 189 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 ASPMQ8IZT6 3477 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 ACAA1P09110 424 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-205ENST00000397017 RAB4BP61018 213 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 POM121Q96HA1 1249 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 C12orf57Q99622 126 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 RARRES2Q99969 163 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms