RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SH2D1BO14796 132 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 KALRNO60229 2985 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 YTHDF2Q9Y5A9 579 aaKnown RBP11.57□□□□□ -0.56
NUP98-204ENST00000397004 AQP7O14520 342 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 LAMTOR5O43504 91 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 ATP6V1FQ16864 119 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 TREML4Q6UXN2 200 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 SGMS2Q8NHU3 365 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 MGST2Q99735 147 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 KNTC1P50748 2209 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 KIR2DL5BA0A0G2JN68 375 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 KIR2DL5BA0A0G2JPC4 375 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 SPATA31B1PQ5VZV4 182 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 CST9LP1Q5W188 147 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 KIR2DL5AQ8N109 375 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 OCC1Q8TAD7 63 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 TMEM18Q96B42 140 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 TRAPPC1Q9Y5R8 145 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 AHRRA9YTQ3 701 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 IGHEP01854 428 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 ARL14EPLP0DKL9 152 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 SOX8P57073 446 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 PRAMEF6Q5VXH4 476 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 FBXW9Q5XUX1 488 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 MCEMP1Q8IX19 187 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 FKBP11Q9NYL4 201 aa11.56□□□□□ -0.56
NUP98-204ENST00000397004 CD1BP29016 333 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 LPAL2Q16609 132 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 LURAP1Q96LR2 239 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 SLC17A3O00476 420 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 RAB29O14966 203 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 FOXH1O75593 365 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 CDKN1AP38936 164 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 LCN2P80188 198 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 C1orf194Q5T5A4 169 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 DEFB127Q9H1M4 99 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 FZR1Q9UM11 496 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 PSG11Q9UQ72 335 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 C15orf65H3BRN8 121 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 MBP02144 154 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 ZNF134P52741 427 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 LTC4SQ16873 150 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 ACOT6Q3I5F7 207 aaPredicted RBP11.55□□□□□ -0.56
NUP98-204ENST00000397004 LBHQ53QV2 105 aaPredicted RBP11.55□□□□□ -0.56
NUP98-204ENST00000397004 MIC13Q5XKP0 118 aa11.55□□□□□ -0.56
NUP98-204ENST00000397004 IGHV1-2P23083 117 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 CBLN1P23435 193 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 G0S2P27469 103 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 FOXL1Q12952 345 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 H2BFWTQ7Z2G1 175 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 MS4A5Q9H3V2 200 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 SEPSECSQ9HD40 501 aaKnown RBP11.54□□□□□ -0.56
NUP98-204ENST00000397004 TMEM30CPA0ZSE6 113 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 LYZL6O75951 148 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 RAB4AP20338 218 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 COMPP49747 757 aaPredicted RBP11.54□□□□□ -0.56
NUP98-204ENST00000397004 MSMO1Q15800 293 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 ABHD12Q8N2K0 398 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 KLF14Q8TD94 323 aaPredicted RBP11.54□□□□□ -0.56
NUP98-204ENST00000397004 SDSLQ96GA7 329 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 IL17BQ9UHF5 180 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 TMEM210A6NLX4 147 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 SCGB1D1O95968 90 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 SP1P08047 785 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 ERVFC1-1P60608 527 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 POLDIP2Q9Y2S7 368 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 CSMD1Q96PZ7 3565 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 PIGBOS1A0A0B4J2F0 54 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 RNF212BA8MTL3 300 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 GABRA2P47869 451 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 DCAF10Q5QP82 559 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 ATP1A1-AS1Q5TC04 95 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 Q8IYB0 196 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 CD177Q8N6Q3 437 aa11.54□□□□□ -0.56
NUP98-204ENST00000397004 A6NNC1 897 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 IQCF6A8MYZ5 107 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
NUP98-204ENST00000397004 MEOX1P50221 254 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 TDGF1P3P51864 188 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 ZNF718Q3SXZ3 478 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 SPRNQ5BIV9 151 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 ASPHD1Q5U4P2 390 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 ABHD17BQ5VST6 288 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 SLC35E4Q6ICL7 350 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 WDR82Q6UXN9 313 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 GCNT2Q8N0V5 402 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 NAGKQ9UJ70 344 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 AGFG2O95081 481 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 TIMP3P35625 211 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 TPTE2P1Q5T6R2 138 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 ACP7Q6ZNF0 438 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 FAM234AQ9H0X4 552 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 OOEPA6NGQ2 149 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 RBMXL2O75526 392 aaKnown RBP11.53□□□□□ -0.56
NUP98-204ENST00000397004 MYOD1P15172 320 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 YPEL3P61236 119 aaPredicted RBP11.53□□□□□ -0.56
NUP98-204ENST00000397004 IQCJQ1A5X6 159 aa11.53□□□□□ -0.56
NUP98-204ENST00000397004 AARDQ4LEZ3 155 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms