RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 CENPWQ5EE01 88 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 NHLRC3Q5JS37 347 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 PLAC1Q9HBJ0 212 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 PSME4Q14997 1843 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 RECKO95980 971 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 PARP14Q460N5 1801 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 CA1P00915 261 aaPredicted RBP12.04□□□□□ -0.48
COL4A3-202ENST00000396578 SNRPD3P62318 126 aaKnown RBP12.04□□□□□ -0.48
COL4A3-202ENST00000396578 UNC119Q13432 240 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 TPRX1Q8N7U7 411 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 LINC00469Q8N7U9 141 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 GPR146Q96CH1 333 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 PRF1P14222 555 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 CCL8P80075 99 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 LIMS2Q7Z4I7 341 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 ZAR1Q86SH2 424 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 SPAG8Q99932 426 aaPredicted RBP12.03□□□□□ -0.48
COL4A3-202ENST00000396578 CBLN1P23435 193 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 ZPLD1Q8TCW7 415 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 CCL27Q9Y4X3 112 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A10PA6NDY2 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A18PA6NE21 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A16PA6NEW6 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A20PA6NIJ5 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A8PA6NJQ4 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A7PA6NKC0 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A22PA8MWA6 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A12PA8MX19 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A5PA8MXJ8 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A23PA8MXZ1 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 ERVH48-1M5A8F1 160 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 ASAH2BP0C7U1 165 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A15PP0C7V4 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A13PP0C7W8 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A14PP0C7W9 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM90A24PP0C7X0 464 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM159AQ6UWV7 190 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 ZNF721Q8TF20 911 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 DNASE2BQ8WZ79 361 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 PTP4A3O75365 173 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FAM106AQ4KMX7 169 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 FOXC2Q99958 501 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 LY75O60449 1722 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 RND2P52198 227 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 PSG4Q00888 419 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 RFLNBQ8N5W9 214 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 ZNF385AQ96PM9 386 aaKnown RBP12.03□□□□□ -0.48
COL4A3-202ENST00000396578 IGHV3-72A0A0B4J1Y9 119 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 COL9A1P20849 921 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 OR5A1Q8NGJ0 315 aa12.03□□□□□ -0.48
COL4A3-202ENST00000396578 STRCP1A6NGW2 1772 aa12.02□□□□□ -0.48
COL4A3-202ENST00000396578 IFITM3Q01628 133 aa12.02□□□□□ -0.48
COL4A3-202ENST00000396578 NACAE9PAV3 2078 aa12.02□□□□□ -0.48
COL4A3-202ENST00000396578 RRHO14718 337 aa12.02□□□□□ -0.48
COL4A3-202ENST00000396578 APCDD1LQ8NCL9 501 aa12.02□□□□□ -0.48
COL4A3-202ENST00000396578 SMIM8Q96KF7 97 aa12.02□□□□□ -0.48
COL4A3-202ENST00000396578 GOLT1AQ6ZVE7 132 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 WNT10AQ9GZT5 417 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 C5orf66Q9H5L9 145 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 ANK1P16157 1881 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 LRRK1Q38SD2 2015 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 ZNF146Q15072 292 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 BHLHA9Q7RTU4 235 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 SIRT4Q9Y6E7 314 aaPredicted RBP12.02□□□□□ -0.49
COL4A3-202ENST00000396578 ATP5G2Q06055 141 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 IFNL4K9M1U5 179 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 C14orf144Q96I85 54 aa12.02□□□□□ -0.49
COL4A3-202ENST00000396578 TRBV5-5A0A0J9YX44 114 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 UPK3AO75631 287 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 ATP5LO75964 103 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 VENTXO95231 258 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 REG1AP05451 166 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 GPR6P46095 362 aaPredicted RBP12.01□□□□□ -0.49
COL4A3-202ENST00000396578 UNQ5815/PRO19632Q6UWF5 114 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 TTTY12Q9BZ98 90 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 IDI2-AS1Q9NZ38 188 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 A0A1W2PPV9 198 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 GCM2O75603 506 aaPredicted RBP12.01□□□□□ -0.49
COL4A3-202ENST00000396578 TMEM95Q3KNT9 176 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 HIST1H2BAQ96A08 127 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 CALYQ9NYX4 217 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 ADAMTSL1Q8N6G6 1762 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 ABCA1O95477 2261 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 KCNS1Q96KK3 526 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 TBL2Q9Y4P3 447 aaKnown RBP12.01□□□□□ -0.49
COL4A3-202ENST00000396578 CCL21O00585 134 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 H2BFSP57053 126 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 HSPE1P61604 102 aaKnown RBP12.01□□□□□ -0.49
COL4A3-202ENST00000396578 ZNF658BQ4V348 819 aaPredicted RBP12.01□□□□□ -0.49
COL4A3-202ENST00000396578 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 C1orf185Q5T7R7 199 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 C18orf15Q96N68 181 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 WNK3Q9BYP7 1800 aa12.01□□□□□ -0.49
COL4A3-202ENST00000396578 DXOO77932 396 aaKnown RBP12□□□□□ -0.49
COL4A3-202ENST00000396578 FGF5P12034 268 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 CYB5R2Q6BCY4 276 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 RPP25Q9BUL9 199 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms