RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 MUC6Q6W4X9 2439 aa13.67□□□□□ -0.22
TRIM39-205ENST00000396551 RBFOX2O43251 390 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRIM39-205ENST00000396551 PCP4P48539 62 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 SELENOVP59797 346 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 CISD2Q8N5K1 135 aaKnown RBP13.66□□□□□ -0.22
TRIM39-205ENST00000396551 CCL13Q99616 98 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 NPCDR1Q9BY65 106 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 SLC39A9Q9NUM3 307 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 A0A087WWC5 75 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 KBTBD11-OT1A0A1B0GTJ5 212 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 FAM90A9PA6NNJ1 464 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 HMGB3O15347 200 aaKnown RBP13.66□□□□□ -0.22
TRIM39-205ENST00000396551 IFNA17P01571 189 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 SNRPEP62304 92 aaKnown RBP13.66□□□□□ -0.22
TRIM39-205ENST00000396551 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 MRGPRGQ86SM5 289 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 NUP37Q8NFH4 326 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 LHX4Q969G2 390 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 MALSU1Q96EH3 234 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 SLC25A22Q9H936 323 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 GYPAP02724 150 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 RELBQ01201 579 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 ADAM5Q6NVV9 412 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 FAM216BQ8N7L0 139 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 Q8N7P7 452 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 TMPRSS5Q9H3S3 457 aa13.66□□□□□ -0.22
TRIM39-205ENST00000396551 ITGB1BP1O14713 200 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 FFAR4Q5NUL3 377 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 ZNF788Q6ZQV5 615 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 S1PR3Q99500 378 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 ZNF251Q9BRH9 671 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 VAX2Q9UIW0 290 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 GAB2Q9UQC2 676 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 TLE1Q04724 770 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 HEPN1Q6WQI6 88 aa13.65□□□□□ -0.22
TRIM39-205ENST00000396551 SNRNP40Q96DI7 357 aaKnown RBP13.65□□□□□ -0.22
TRIM39-205ENST00000396551 SAA2-SAA4A0A096LPE2 208 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 DPRXA6NFQ7 191 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 PRRG2O14669 202 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 SAA2P0DJI9 122 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-205ENST00000396551 PMS2P11Q13670 270 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 WFDC8Q8IUA0 241 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 ZNF439Q8NDP4 499 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 OR4A16Q8NH70 328 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 SMG1Q96Q15 3661 aaKnown RBP13.64□□□□□ -0.23
TRIM39-205ENST00000396551 MMP23AO75900 390 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 THBDP07204 575 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 VDAC2P45880 294 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-205ENST00000396551 SPCS3P61009 180 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 OR10G9Q8NGN4 311 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 OR10G7Q8NGN6 311 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 P2RX4Q99571 388 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 SH3BGRL2Q9UJC5 107 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 TRGV10A0A0A0MS01 117 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 CTXND1A0A1B0GTU2 59 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 C5orf52A6NGY3 159 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 C16orf97H3BN30 126 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 DEFA4P12838 97 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 NQO2P16083 231 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 RAB7AP51149 207 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 TMEM108Q6UXF1 575 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
TRIM39-205ENST00000396551 YLPM1P49750 1951 aaKnown RBP13.63□□□□□ -0.23
TRIM39-205ENST00000396551 TNFSF4P23510 183 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 CD81P60033 236 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 ACACAQ13085 2346 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 ERVK-16P61578 105 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 CCL8P80075 99 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 ELOBQ15370 118 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 MAJINQ3KP22 176 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 PDLIM3Q53GG5 364 aaPredicted RBP13.63□□□□□ -0.23
TRIM39-205ENST00000396551 TEX36Q5VZQ5 186 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 ASCL5Q7RTU5 278 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 ZCCHC24Q8N2G6 241 aaKnown RBP13.63□□□□□ -0.23
TRIM39-205ENST00000396551 OR52E5Q8NH55 327 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 Q8WTZ3 238 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 DMXL2Q8TDJ6 3036 aa13.63□□□□□ -0.23
TRIM39-205ENST00000396551 IFNA4P05014 189 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 KIR2DS2P43631 304 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 ADIPOQQ15848 244 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 WDR83OSQ9Y284 106 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 RRHO14718 337 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 IFNA1P01562 189 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 CXCL1P09341 107 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 ERVFRD-1P60508 538 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 ZNF383Q8NA42 475 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 ELOVL5Q9NYP7 299 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 IDI2-AS1Q9NZ38 188 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 APC2O95996 2303 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 PRSS46E5RG02 174 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 MBP02144 154 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 SFTPCP11686 197 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.62□□□□□ -0.23
TRIM39-205ENST00000396551 OR4S2Q8NH73 311 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 SDF2L1Q9HCN8 221 aa13.62□□□□□ -0.23
TRIM39-205ENST00000396551 DCHS1Q96JQ0 3298 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms