RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PDPNQ86YL7 162 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 PUSL1Q8N0Z8 303 aaKnown RBP10.27□□□□□ -0.77
TRIM39-204ENST00000396548 NSG2Q9Y328 171 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 IGHV1-3A0A0C4DH29 117 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 P2RY1P47900 373 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 TGIF2LXQ8IUE1 241 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 FOXRED2Q8IWF2 684 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 AMMECR1Q9Y4X0 333 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-204ENST00000396548 TET2Q6N021 2002 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-204ENST00000396548 TRAV3A0A0B4J244 114 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 ARG1P05089 322 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 TPTE2P1Q5T6R2 138 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 H2BFWTQ7Z2G1 175 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 CYTL1Q9NRR1 136 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 CELSR1Q9NYQ6 3014 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
TRIM39-204ENST00000396548 TOX4O94842 621 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 RTL8BQ17RB0 113 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 MRGPRG-AS1Q2M3A8 158 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 OR4A47Q6IF82 309 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 OSR1Q8TAX0 266 aaPredicted RBP10.26□□□□□ -0.77
TRIM39-204ENST00000396548 RITA1Q96K30 269 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 MAGT1Q9H0U3 335 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.26□□□□□ -0.77
TRIM39-204ENST00000396548 TMEM140Q9NV12 185 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 TXNL1O43396 289 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 CHST1O43916 411 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 NXPH3O95157 252 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 RLN2P04090 185 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 USF1P22415 310 aaPredicted RBP10.26□□□□□ -0.77
TRIM39-204ENST00000396548 TNFRSF9Q07011 255 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 CFHR4Q92496 578 aa10.26□□□□□ -0.77
TRIM39-204ENST00000396548 BCL2L11O43521 198 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 SSSCA1O60232 199 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 GAPDHP04406 335 aaKnown RBP10.25□□□□□ -0.77
TRIM39-204ENST00000396548 MC5RP33032 325 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 LHFPL4Q7Z7J7 247 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 INO80EQ8NBZ0 244 aaPredicted RBP10.25□□□□□ -0.77
TRIM39-204ENST00000396548 QTRT1Q9BXR0 403 aaKnown RBP10.25□□□□□ -0.77
TRIM39-204ENST00000396548 ARL6Q9H0F7 186 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 LYRM2Q9NU23 88 aaPredicted RBP10.25□□□□□ -0.77
TRIM39-204ENST00000396548 WASHC3Q9Y3C0 194 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 CR1P17927 2039 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 HTR1DP28221 377 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 RPL12P30050 165 aaKnown RBP10.25□□□□□ -0.77
TRIM39-204ENST00000396548 UBE2E1P51965 193 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 ZNF429Q86V71 674 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 DYNAPQ8N1N2 210 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 RNASE11Q8TAA1 199 aaKnown RBP10.25□□□□□ -0.77
TRIM39-204ENST00000396548 LHX4Q969G2 390 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 BSCL2Q96G97 398 aaPredicted RBP10.25□□□□□ -0.77
TRIM39-204ENST00000396548 RHOVQ96L33 236 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 TMEM14BQ9NUH8 114 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
TRIM39-204ENST00000396548 LEUTXA8MZ59 168 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 SYNGR2O43760 224 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 HRASP01112 189 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 APOA2P02652 100 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 AP2S1P53680 142 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-204ENST00000396548 TEX261Q6UWH6 196 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 PRSS57Q6UWY2 283 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 OR52E5Q8NH55 327 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 RBKSQ9H477 322 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 BET1LQ9NYM9 111 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 FOXA2Q9Y261 457 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-204ENST00000396548 U3KQ87 197 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 GPR137BO60478 399 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 CFDP00746 253 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-204ENST00000396548 CRYGBP07316 175 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 UBE2KP61086 200 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 GPR157Q5UAW9 335 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 OR4C13Q8NGP0 309 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 SMIM8Q96KF7 97 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 IGSF23A1L1A6 192 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 C15orf61A6NNL5 157 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 TAS2R30P59541 319 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 LOXL1Q08397 574 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-204ENST00000396548 MINOS1Q5TGZ0 78 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 SSX9Q7RTT3 188 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 FLYWCH2Q96CP2 140 aaKnown RBP10.24□□□□□ -0.77
TRIM39-204ENST00000396548 RAB40CQ96S21 281 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 TMA7Q9Y2S6 64 aaKnown RBP10.24□□□□□ -0.77
TRIM39-204ENST00000396548 WSB1Q9Y6I7 421 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 MINOS1-NBL1R4GNA1 71 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 DOPEY2Q9Y3R5 2298 aa10.24□□□□□ -0.77
TRIM39-204ENST00000396548 UPK2O00526 184 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 MSMBP08118 114 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 SAA1P0DJI8 122 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-204ENST00000396548 RAB13P51153 203 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 OR2C3Q8N628 320 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 LPAR2Q9HBW0 351 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 ARID1AO14497 2285 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 CENPVL3A0A0U1RRI6 287 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 FGF2P09038 288 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 ERVK-16P61578 105 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 ARPC5LQ9BPX5 153 aa10.23□□□□□ -0.77
TRIM39-204ENST00000396548 TBL2Q9Y4P3 447 aaKnown RBP10.23□□□□□ -0.77
TRIM39-204ENST00000396548 C4BPBP20851 252 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 OR2B8PP59922 312 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 FBLN7Q53RD9 439 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms