RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 GUCD1Q96NT3 240 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 KCNIP2Q9NS61 270 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 AURKAIP1Q9NWT8 199 aaPredicted RBP13.04□□□□□ -0.32
HOXA3-202ENST00000396352 PRR14LQ5THK1 2151 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 PRSS46E5RG02 174 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 RPL15P61313 204 aaKnown RBP13.04□□□□□ -0.32
HOXA3-202ENST00000396352 KCNIP4Q6PIL6 250 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 ZNF114Q8NC26 417 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 A0A1B0GV90 55 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 A8MWP6 167 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 TIMM8AO60220 97 aaPredicted RBP13.03□□□□□ -0.32
HOXA3-202ENST00000396352 NDUFB4O95168 129 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 FAM78BQ5VT40 261 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 TREML4Q6UXN2 200 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 SPINT2O43291 252 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 FCGR3BO75015 233 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 GCGP01275 180 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 ADH4P08319 380 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 LTC4SQ16873 150 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 TMEM178AQ8NBL3 297 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 WASF3Q9UPY6 502 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 GPR179Q6PRD1 2367 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 FAM90A9PA6NNJ1 464 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 C1QTNF9P0C862 333 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 GPR12P47775 334 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 TRIP6Q15654 476 aaKnown RBP13.03□□□□□ -0.32
HOXA3-202ENST00000396352 CST9LP1Q5W188 147 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 SSX9Q7RTT3 188 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 PLPPR2Q96GM1 343 aa13.03□□□□□ -0.32
HOXA3-202ENST00000396352 PATZ1Q9HBE1 687 aaKnown RBP13.03□□□□□ -0.32
HOXA3-202ENST00000396352 TRBV20OR9-2A0A075B6H5 130 aa13.02□□□□□ -0.32
HOXA3-202ENST00000396352 PGPEP1LA6NFU8 196 aa13.02□□□□□ -0.32
HOXA3-202ENST00000396352 RRHO14718 337 aa13.02□□□□□ -0.32
HOXA3-202ENST00000396352 CECR9P0C854 216 aa13.02□□□□□ -0.32
HOXA3-202ENST00000396352 OPRK1P41145 380 aa13.02□□□□□ -0.32
HOXA3-202ENST00000396352 VDAC2P45880 294 aaPredicted RBP13.02□□□□□ -0.32
HOXA3-202ENST00000396352 EDDM3AQ14507 147 aa13.02□□□□□ -0.32
HOXA3-202ENST00000396352 FAM90A1Q86YD7 464 aa13.02□□□□□ -0.32
HOXA3-202ENST00000396352 MGST2Q99735 147 aa13.02□□□□□ -0.32
HOXA3-202ENST00000396352 KNTC1P50748 2209 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 MPDU1O75352 247 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 HPRT1P00492 218 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 FABP6P51161 128 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 SPCS3P61009 180 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 PDLIM3Q53GG5 364 aaPredicted RBP13.02□□□□□ -0.33
HOXA3-202ENST00000396352 VWA1Q6PCB0 445 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 TRAT1Q6PIZ9 186 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 DHRS13Q6UX07 377 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 VKORC1L1Q8N0U8 176 aa13.02□□□□□ -0.33
HOXA3-202ENST00000396352 ARL14EPLP0DKL9 152 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 TNFSF10P50591 281 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 PRAMEF5Q5TYX0 476 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 CNEP1R1Q8N9A8 125 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 A0A1B0GWJ7 208 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 A0A1W2PPV4 95 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 F6UZH7 168 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 CDX4O14627 284 aaPredicted RBP13.01□□□□□ -0.33
HOXA3-202ENST00000396352 RBFOX2O43251 390 aaKnown RBP eCLIP13.01□□□□□ -0.332e-9■□□□□ 10.6
HOXA3-202ENST00000396352 KIR2DL2P43627 348 aaPredicted RBP13.01□□□□□ -0.33
HOXA3-202ENST00000396352 CNN1P51911 297 aaKnown RBP13.01□□□□□ -0.33
HOXA3-202ENST00000396352 TMPRSS3P57727 454 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 MORN2Q502X0 79 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 GBGT1Q8N5D6 347 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 LRRC29Q8WV35 223 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 IMMP2LQ96T52 175 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 GGTLC1Q9BX51 225 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 URB1O60287 2271 aaKnown RBP13.01□□□□□ -0.33
HOXA3-202ENST00000396352 SOX15O60248 233 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 IGHG3P01860 377 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 PRDX2P32119 198 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 C1orf159Q96HA4 380 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 MS4A5Q9H3V2 200 aa13.01□□□□□ -0.33
HOXA3-202ENST00000396352 TRAV3A0A0B4J244 114 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 GFRA3O60609 400 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 SSX2Q16385 188 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 RPL39P5Q59GN2 51 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 OR52E5Q8NH55 327 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 TMEM18Q96B42 140 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 NOL4LQ96MY1 436 aaPredicted RBP13□□□□□ -0.33
HOXA3-202ENST00000396352 IGKV1D-17A0A075B6S4 117 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 STAG3L2P0CL84 134 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 STAG3L3P0CL85 134 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 HOXC12P31275 282 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 RELBQ01201 579 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 FOXL1Q12952 345 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 HES3Q5TGS1 186 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 OR4A16Q8NH70 328 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 SFRP2Q96HF1 295 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 FAM234AQ9H0X4 552 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 PXMP4Q9Y6I8 212 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
HOXA3-202ENST00000396352 ZNF134P52741 427 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 SOX8P57073 446 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 MBNL2Q5VZF2 373 aaKnown RBP13□□□□□ -0.33
HOXA3-202ENST00000396352 C1orf162Q8NEQ5 155 aaPredicted RBP13□□□□□ -0.33
HOXA3-202ENST00000396352 JPT1Q9UK76 154 aa13□□□□□ -0.33
HOXA3-202ENST00000396352 A0A0U1RQK1 487 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 ZNF320A2RRD8 509 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 M0R1X1 148 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms