RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 OOSP1A8MZH6 123 aa16.48■□□□□ 0.23
VCPKMT-202ENST00000395860 MBPP02686 304 aaPredicted RBP16.48■□□□□ 0.23
VCPKMT-202ENST00000395860 PET100P0DJ07 73 aa16.48■□□□□ 0.23
VCPKMT-202ENST00000395860 NKX2-1P43699 371 aaPredicted RBP16.48■□□□□ 0.23
VCPKMT-202ENST00000395860 CCDC144NLQ6NUI1 221 aa16.48■□□□□ 0.23
VCPKMT-202ENST00000395860 HARBI1Q96MB7 349 aa16.48■□□□□ 0.23
VCPKMT-202ENST00000395860 AIFM2Q9BRQ8 373 aa16.48■□□□□ 0.23
VCPKMT-202ENST00000395860 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.47■□□□□ 0.234e-7■■■■■ 43.8
VCPKMT-202ENST00000395860 J3QLI3 93 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 TIMM23O14925 209 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 PITX3O75364 302 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 SAA4P35542 130 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 RPS16P62249 146 aaKnown RBP16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 GPR157Q5UAW9 335 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 GRPEL2Q8TAA5 225 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 MALSU1Q96EH3 234 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 ZFP57Q9NU63 452 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 TMEM140Q9NV12 185 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 COA4Q9NYJ1 87 aa16.47■□□□□ 0.23
VCPKMT-202ENST00000395860 UNC79Q9P2D8 2635 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 IGHV3OR16-10A0A075B7F0 116 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 IGHV1-69DA0A0B4J2H0 117 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 ST8SIA3O43173 380 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 NXPH3O95157 252 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 IGHV1-69P01742 117 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 POU2AF1Q16633 256 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 C17orf50Q8WW18 174 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 MS4A7Q9GZW8 240 aaPredicted RBP16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 MBD2Q9UBB5 411 aa16.46■□□□□ 0.23
VCPKMT-202ENST00000395860 K7EPK0 472 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 RBMXL2O75526 392 aaKnown RBP16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 RLN2P04090 185 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 SLC25A4P12235 298 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 PAX6P26367 422 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 CXorf66Q5JRM2 361 aaPredicted RBP16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 CYB5R2Q6BCY4 276 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 OR4A47Q6IF82 309 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 DYNAPQ8N1N2 210 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 FAM71E2Q8N5Q1 922 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 POMT1Q9Y6A1 747 aa16.46■□□□□ 0.22
VCPKMT-202ENST00000395860 FAM90A9PA6NNJ1 464 aa16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 SRRM4A7MD48 611 aaKnown RBP16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 OR9G9P0C7N8 305 aa16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 ARHGDIBP52566 201 aa16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 RUSC1-AS1Q66K80 236 aa16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 PRSS54Q6PEW0 395 aa16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 OR4A16Q8NH70 328 aa16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 NSG2Q9Y328 171 aa16.45■□□□□ 0.22
VCPKMT-202ENST00000395860 H0YIZ8 118 aa16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 AVPP01185 164 aa16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 CD1BP29016 333 aa16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 ID3Q02535 119 aa16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 ZNF546Q86UE3 836 aa16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 CIARTQ8N365 385 aaPredicted RBP16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 CFHR4Q92496 578 aa16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 RNF126Q9BV68 326 aa16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 OR5AC2Q9NZP5 309 aa16.44■□□□□ 0.22
VCPKMT-202ENST00000395860 HMSDA8MTL9 139 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 SMAD7O15105 426 aaKnown RBP16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 ARPC5O15511 151 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 DEDDO75618 318 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 SAA1P0DJI8 122 aaPredicted RBP16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 IGHV4-38-2P0DP08 117 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 HABP2Q14520 560 aaPredicted RBP16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 BRD3OSQ6XYD6 125 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 DCUN1D4Q92564 292 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 MAGT1Q9H0U3 335 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 RCL1Q9Y2P8 373 aaKnown RBP16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 HECTD1Q9ULT8 2610 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 WRBO00258 174 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 SNAPC5O75971 98 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 LGALS7P47929 136 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 OR2B8PP59922 312 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 POLR2GP62487 172 aaKnown RBP eCLIP16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 AJUBAQ96IF1 538 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 ITGB1BP2Q9UKP3 347 aa16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 MAP1AP78559 2803 aaPredicted RBP16.43■□□□□ 0.22
VCPKMT-202ENST00000395860 TRAV3A0A0B4J244 114 aa16.42■□□□□ 0.22
VCPKMT-202ENST00000395860 VENTXO95231 258 aa16.42■□□□□ 0.22
VCPKMT-202ENST00000395860 LYL1P12980 280 aa16.42■□□□□ 0.22
VCPKMT-202ENST00000395860 RELBQ01201 579 aa16.42■□□□□ 0.22
VCPKMT-202ENST00000395860 TMEM65Q6PI78 240 aa16.42■□□□□ 0.22
VCPKMT-202ENST00000395860 RITA1Q96K30 269 aa16.42■□□□□ 0.22
VCPKMT-202ENST00000395860 BET1LQ9NYM9 111 aa16.42■□□□□ 0.22
VCPKMT-202ENST00000395860 FAM90A26D6RGX4 464 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 SSSCA1O60232 199 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 IGKV1D-33P01593 117 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 IGKV1-33P01594 117 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 IGLV2-23P01705 113 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 VMA21Q3ZAQ7 101 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 PUSL1Q8N0Z8 303 aaKnown RBP16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 VSTM2AQ8TAG5 236 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 QTRT1Q9BXR0 403 aaKnown RBP16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 PVALBP20472 110 aaPredicted RBP16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 KLF17Q5JT82 389 aaPredicted RBP16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 C9orf62Q8N4C0 152 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 TSNAXQ99598 290 aaKnown RBP16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 RNF5Q99942 180 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms