RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 COA4Q9NYJ1 87 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 IGHV3OR16-10A0A075B7F0 116 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 IGHV3-72A0A0B4J1Y9 119 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 FAM90A9PA6NNJ1 464 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 SRRM4A7MD48 611 aaKnown RBP12.16□□□□□ -0.46
PTPN20-206ENST00000395722 VENTXO95231 258 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 HRASP01112 189 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 ARHGDIBP52566 201 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 BPIFB3P59826 476 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 OR4D5Q8NGN0 318 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 RHOVQ96L33 236 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 PDCD10Q9BUL8 212 aa12.16□□□□□ -0.46
PTPN20-206ENST00000395722 RANBP3Q9H6Z4 567 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-206ENST00000395722 IGLV2-23P01705 113 aa12.15□□□□□ -0.46
PTPN20-206ENST00000395722 EBI3Q14213 229 aa12.15□□□□□ -0.46
PTPN20-206ENST00000395722 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
PTPN20-206ENST00000395722 BRD3OSQ6XYD6 125 aa12.15□□□□□ -0.46
PTPN20-206ENST00000395722 OR2T35Q8NGX2 323 aa12.15□□□□□ -0.46
PTPN20-206ENST00000395722 RNF5Q99942 180 aa12.15□□□□□ -0.46
PTPN20-206ENST00000395722 AIFM2Q9BRQ8 373 aa12.15□□□□□ -0.46
PTPN20-206ENST00000395722 AKAP9Q99996 3911 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 CD5LO43866 347 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 PAX6P26367 422 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 LGALS7P47929 136 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 ERVK-16P61578 105 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 SMCO1Q147U7 214 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 AARDQ4LEZ3 155 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 Q5BKY6 102 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 H2BFWTQ7Z2G1 175 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 PUSL1Q8N0Z8 303 aaKnown RBP12.14□□□□□ -0.47
PTPN20-206ENST00000395722 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
PTPN20-206ENST00000395722 RITA1Q96K30 269 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 HARBI1Q96MB7 349 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
PTPN20-206ENST00000395722 MEGF9Q9H1U4 602 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 CACNG5Q9UF02 275 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 CSPG4Q6UVK1 2322 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 SHOXO15266 292 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 DYNLT3P51808 116 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 THOC7Q6I9Y2 204 aaKnown RBP12.14□□□□□ -0.47
PTPN20-206ENST00000395722 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 VKORC1L1Q8N0U8 176 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 PPP1R1CQ8WVI7 109 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 TMEM140Q9NV12 185 aa12.14□□□□□ -0.47
PTPN20-206ENST00000395722 A0A0U1RQK1 487 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 SMLR1H3BR10 107 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 OR9G9P0C7N8 305 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 RPS16P62249 146 aaKnown RBP12.13□□□□□ -0.47
PTPN20-206ENST00000395722 C9orf139Q6ZV77 190 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 THNSL2Q86YJ6 484 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 Q8N6K4 173 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 DMBX1Q8NFW5 382 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 GSKIPQ9P0R6 139 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 TEX15Q9BXT5 2789 aa12.13□□□□□ -0.47
PTPN20-206ENST00000395722 TRAV14DV4A0A0A6YYC5 116 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 C1QBP02746 253 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 SAA1P0DJI8 122 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-206ENST00000395722 UBE2KP61086 200 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 RELBQ01201 579 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 FOXRED2Q8IWF2 684 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 NANPQ8TBE9 248 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 NUP50Q9UKX7 468 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 MOSP00540 346 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 IGKV1D-33P01593 117 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 IGKV1-33P01594 117 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 MBPP02686 304 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-206ENST00000395722 CRYGBP07316 175 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 BRS3P32247 399 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 ID3Q02535 119 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 SPNS3Q6ZMD2 512 aa12.12□□□□□ -0.47
PTPN20-206ENST00000395722 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-206ENST00000395722 TSNAXQ99598 290 aaKnown RBP12.12□□□□□ -0.47
PTPN20-206ENST00000395722 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-206ENST00000395722 TRAV3A0A0B4J244 114 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 BOLA2-SMG1P6H3BVE0 249 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 UPK2O00526 184 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 MPC2O95563 127 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 SNRNP70P08621 437 aaKnown RBP12.11□□□□□ -0.47
PTPN20-206ENST00000395722 PSMB6P28072 239 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 FGL1Q08830 312 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 RAB32Q13637 225 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 OR2T10Q8NGZ9 312 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 TMEM167AQ8TBQ9 72 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 SOX21Q9Y651 276 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-206ENST00000395722 ACANP16112 2415 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 OTOGQ6ZRI0 2925 aa12.11□□□□□ -0.47
PTPN20-206ENST00000395722 FAM90A26D6RGX4 464 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 SPDEFO95238 335 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 FGF2P09038 288 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 LYL1P12980 280 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 PSG5Q15238 335 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 AANATQ16613 207 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 CXorf66Q5JRM2 361 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-206ENST00000395722 TEX29Q8N6K0 151 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 NPBQ8NG41 125 aa12.1□□□□□ -0.47
PTPN20-206ENST00000395722 OR11H4Q8NGC9 324 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms