RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 OR6M1Q8NGM8 313 aa11.8□□□□□ -0.52
SNCA-205ENST00000394991 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
SNCA-205ENST00000394991 Q9N2K0 584 aa11.8□□□□□ -0.52
SNCA-205ENST00000394991 PLEKHJ1Q9NW61 149 aa11.8□□□□□ -0.52
SNCA-205ENST00000394991 KLK5Q9Y337 293 aaPredicted RBP11.8□□□□□ -0.52
SNCA-205ENST00000394991 TMEM14DPA8MWL7 114 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 SHOXO15266 292 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 SOCS1O15524 211 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 TUSC2O75896 110 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 NDUFB8O95169 186 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 PSMB9P28065 219 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 IDO2Q6ZQW0 420 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 SPARTQ8N0X7 666 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 OR52B4Q8NGK2 314 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 GFI1Q99684 422 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 YTHDF1Q9BYJ9 559 aaKnown RBP11.79□□□□□ -0.52
SNCA-205ENST00000394991 RIMS4Q9H426 269 aaPredicted RBP11.79□□□□□ -0.52
SNCA-205ENST00000394991 SDHAF2Q9NX18 166 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 MLXQ9UH92 298 aa11.79□□□□□ -0.52
SNCA-205ENST00000394991 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 TMEM213A2RRL7 107 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 LGALS9O00182 355 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 MPPED1O15442 326 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 OR2J3O76001 311 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 OR2C1O95371 312 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 BPNT1O95861 308 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 CBLN1P23435 193 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 RAB11BQ15907 218 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 ZNF57Q68EA5 555 aaPredicted RBP11.78□□□□□ -0.52
SNCA-205ENST00000394991 LGALS9CQ6DKI2 356 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 LPAR5Q9H1C0 372 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 OR2D2Q9H210 308 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 NDUFB11Q9NX14 153 aa11.78□□□□□ -0.52
SNCA-205ENST00000394991 FOXI3A8MTJ6 420 aaPredicted RBP11.77□□□□□ -0.53
SNCA-205ENST00000394991 SLC17A2O00624 439 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 GGCTO75223 188 aaKnown RBP11.77□□□□□ -0.53
SNCA-205ENST00000394991 SCAF4O95104 1147 aaKnown RBP11.77□□□□□ -0.53
SNCA-205ENST00000394991 CD3GP09693 182 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 CD37P11049 281 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 CLDN12P56749 244 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 UBE2KP61086 200 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 DEFB135Q30KP9 77 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 VMA21Q3ZAQ7 101 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 UBE2UQ5VVX9 321 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 C19orf35Q6ZS72 473 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 TEX45Q8NA69 505 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 NECAP1Q8NC96 275 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 ACOT12Q8WYK0 555 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 C12orf4Q9NQ89 552 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 MGAT4AQ9UM21 535 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 TP53TG1Q9Y2A0 90 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 V9GY05 133 aa11.77□□□□□ -0.53
SNCA-205ENST00000394991 TRDV1A0A1B0GX56 115 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 PDCD5O14737 125 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 SPRY2O43597 315 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 ATF4P18848 351 aaPredicted RBP11.76□□□□□ -0.53
SNCA-205ENST00000394991 MYL9P24844 172 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 BMI1P35226 326 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 PSMD7P51665 324 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 TMEM50BP56557 158 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 TM4SF20Q53R12 229 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 HES5Q5TA89 166 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 Q6ZWC4 215 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 TTC9CQ8N5M4 171 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 FCGR1BQ92637 280 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 URM1Q9BTM9 101 aaKnown RBP11.76□□□□□ -0.53
SNCA-205ENST00000394991 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
SNCA-205ENST00000394991 MUC4Q99102 2169 aa11.76□□□□□ -0.53
SNCA-205ENST00000394991 A8MWP6 167 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 TRDCB7Z8K6 153 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 CRYZL1O95825 349 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 IGHV3-23P01764 117 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 PRR20EP86478 221 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 PRR20CP86479 221 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 PRR20DP86480 221 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 PRR20BP86481 221 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 PRR20AP86496 221 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 CBX3Q13185 183 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 RTL8BQ17RB0 113 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 C22orf42Q6IC83 251 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 ZNF773Q6PK81 442 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 BTNL8Q6UX41 500 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 GPHB5Q86YW7 130 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 FAM89BQ8N5H3 189 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 UXS1Q8NBZ7 420 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
SNCA-205ENST00000394991 FAM3DQ96BQ1 224 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 CCDC140Q96MF4 163 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 S4R3C0 116 aa11.75□□□□□ -0.53
SNCA-205ENST00000394991 TRAV1-2A0A0B4J238 106 aa11.74□□□□□ -0.53
SNCA-205ENST00000394991 OR10A3P58181 314 aa11.74□□□□□ -0.53
SNCA-205ENST00000394991 TAGLNQ01995 201 aaKnown RBP11.74□□□□□ -0.53
SNCA-205ENST00000394991 C2orf76Q3KRA6 126 aa11.74□□□□□ -0.53
SNCA-205ENST00000394991 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
SNCA-205ENST00000394991 ARHGAP5-AS1Q96IT6 56 aa11.74□□□□□ -0.53
SNCA-205ENST00000394991 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
SNCA-205ENST00000394991 HSF4Q9ULV5 492 aa11.74□□□□□ -0.53
SNCA-205ENST00000394991 HMX3A6NHT5 357 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms