RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 SAA2P0DJI9 122 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-202ENST00000394888 MYOD1P15172 320 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 RAB11AP62491 216 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 CATR1Q13166 79 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 ZNF383Q8NA42 475 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 SCGB1C1Q8TD33 95 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 FAM216AQ8WUB2 273 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 LSM4Q9Y4Z0 139 aaKnown RBP12.64□□□□□ -0.39
CPSF7-202ENST00000394888 RBFOX2O43251 390 aaKnown RBP eCLIP12.64□□□□□ -0.394e-7■□□□□ 10.3
CPSF7-202ENST00000394888 SPNS3Q6ZMD2 512 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
CPSF7-202ENST00000394888 JKAMPQ9P055 326 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 TNFRSF13BO14836 293 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-202ENST00000394888 GZMHP20718 246 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 CEBPGP53567 150 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 SIRT7Q9NRC8 400 aa12.64□□□□□ -0.39
CPSF7-202ENST00000394888 SPRY3O43610 288 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BKO60814 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 FCGR3BO75015 233 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 CYB5R3P00387 301 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BJP06899 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 NQO2P16083 231 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 FGF7P21781 194 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BOP23527 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BBP33778 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 KLF3P57682 345 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BDP58876 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BCP62807 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST2H2BEQ16778 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 ATP6V1FQ16864 119 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-202ENST00000394888 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 IQCF2Q8IXL9 164 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 SNIP1Q8TAD8 396 aaKnown RBP12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BHQ93079 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 MGST2Q99735 147 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BNQ99877 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HIST1H2BMQ99879 126 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 HPRT1P00492 218 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 TREML4Q6UXN2 200 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 SLC16A13Q7RTY0 426 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 OR52E5Q8NH55 327 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 FAM57AQ8TBR7 257 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 NIPSNAP3BQ9BS92 247 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 A0A0G2JNJ9 132 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 SPINT2O43291 252 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
CPSF7-202ENST00000394888 AKR1D1P51857 326 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 TEX36Q5VZQ5 186 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 RAB24Q969Q5 203 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 TMEM14BQ9NUH8 114 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 GFOD1Q9NXC2 390 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 Q9UFV3 132 aa12.63□□□□□ -0.39
CPSF7-202ENST00000394888 ZFHX2Q9C0A1 2572 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-202ENST00000394888 MEF2BQ02080 365 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-202ENST00000394888 CDPF1Q6NVV7 123 aa12.62□□□□□ -0.39
CPSF7-202ENST00000394888 ZNF788Q6ZQV5 615 aa12.62□□□□□ -0.39
CPSF7-202ENST00000394888 PYGO2Q9BRQ0 406 aa12.62□□□□□ -0.39
CPSF7-202ENST00000394888 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
CPSF7-202ENST00000394888 ARSJQ5FYB0 599 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-202ENST00000394888 NINJ1Q92982 152 aa12.62□□□□□ -0.39
CPSF7-202ENST00000394888 URGCP-MRPS24S4R325 110 aa12.62□□□□□ -0.39
CPSF7-202ENST00000394888 CTXND1A0A1B0GTU2 59 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 AP4M1O00189 453 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 PFN1P07737 140 aaKnown RBP12.61□□□□□ -0.39
CPSF7-202ENST00000394888 HOXA5P20719 270 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 GPR12P47775 334 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 TMEM249Q2WGJ8 235 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 OR10G9Q8NGN4 311 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 OR10G7Q8NGN6 311 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 SFXN3Q9BWM7 321 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 UNKLQ9H9P5 680 aaKnown RBP12.61□□□□□ -0.39
CPSF7-202ENST00000394888 CD40P25942 277 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 FFAR4Q5NUL3 377 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 NCMAPQ5T1S8 102 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 DOLPP1Q86YN1 238 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 FAM216BQ8N7L0 139 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 SRRM4A7MD48 611 aaKnown RBP12.61□□□□□ -0.39
CPSF7-202ENST00000394888 B4DEV8 164 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 RPL23P62829 140 aaKnown RBP12.61□□□□□ -0.39
CPSF7-202ENST00000394888 GFI1BQ5VTD9 330 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 CYP2G1PQ6ZSU1 146 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 NUP37Q8NFH4 326 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 CORO2AQ92828 525 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 TMEM140Q9NV12 185 aa12.61□□□□□ -0.39
CPSF7-202ENST00000394888 M0R1X1 148 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 NUBP1P53384 320 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 IL19Q9UHD0 177 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 TRGV8A0A0C4DH27 118 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 VHLLQ6RSH7 139 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 OR10P1Q8NGE3 313 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 FAM234AQ9H0X4 552 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 IDI2-AS1Q9NZ38 188 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 LAMP3Q9UQV4 416 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 C15orf61A6NNL5 157 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 CEBPZOSA8MTT3 80 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 KBTBD11O94819 623 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 EIF2S3P41091 472 aaKnown RBP12.6□□□□□ -0.39
CPSF7-202ENST00000394888 SSX9Q7RTT3 188 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms