RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TMEM45BQ96B21 275 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 UNC13CQ8NB66 2214 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 IGHV3-35A0A0C4DH35 117 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 CA2P00918 260 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 HLA-DQB1P01920 261 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 GLRXP35754 106 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 ZNF56Q15929 161 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 H3BTX0 84 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 DLX6P56179 175 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 C2orf83Q53S99 150 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 C1orf100Q5SVJ3 147 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 FAM74A4Q5TZK3 123 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 Q96M66 194 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 BRWD1Q9NSI6 2320 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 TRBV5-7A0A0A0MS05 114 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 ZIC3O60481 467 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 IGHV3-48P01763 117 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 P2RY4P51582 365 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 ZNF146Q15072 292 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 GPR82Q96P67 336 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 MAP1LC3AQ9H492 121 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 CHCHD2Q9Y6H1 151 aaPredicted RBP8.86□□□□□ -0.99
COL4A6-203ENST00000394872 C17orf51A8MQB3 221 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 GDF9O60383 454 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 RNASE1P07998 156 aaKnown RBP8.86□□□□□ -0.99
COL4A6-203ENST00000394872 ARL14EPLP0DKL9 152 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 HKR1P10072 659 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 RAB9AP51151 201 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 TMEM177Q53S58 311 aa8.86□□□□□ -0.99
COL4A6-203ENST00000394872 MUC1P15941 1255 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-203ENST00000394872 MDKP21741 143 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-203ENST00000394872 TAS2R60P59551 318 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 C10orf128Q5T292 105 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 OR51G1Q8NGK1 321 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 SMDT1Q9H4I9 107 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 ZFC3H1O60293 1989 aaKnown RBP8.85□□□□□ -0.99
COL4A6-203ENST00000394872 FAM90A26D6RGX4 464 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 C8orf88P0DMB2 117 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 HIST1H1AQ02539 215 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-203ENST00000394872 TMEM105Q8N8V8 129 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 CECR9P0C854 216 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 ZNF818PQ6ZRF7 136 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 IGHV3-66A0A0C4DH42 116 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 CXCL2P19875 107 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 GP6Q9HCN6 339 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 TCF19Q9Y242 345 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 TMEM238LA0A1B0GVL6 79 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 A6NJY4 79 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 NPFFO15130 113 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 SPOCK3Q9BQ16 436 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 AMY1AP04745 511 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 IL4P05112 153 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 FAM209BQ5JX69 171 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 ACP7Q6ZNF0 438 aa8.85□□□□□ -0.99
COL4A6-203ENST00000394872 SRSF12Q8WXF0 261 aaKnown RBP8.85□□□□□ -0.99
COL4A6-203ENST00000394872 A0A1W2PRX2 142 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 GCM2O75603 506 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-203ENST00000394872 F12P00748 615 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-203ENST00000394872 RPL39P5Q59GN2 51 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 FAM159AQ6UWV7 190 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 TP53RKQ96S44 253 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 TXNDC17Q9BRA2 123 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 TUBGCP6Q96RT7 1819 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 LINC00862A6NCI5 91 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 J3QW42 95 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 PARP14Q460N5 1801 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 A0A0G2JMM0 328 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 A0A1W2PPB8 328 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 A0A1W2PRS3 328 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 KIR3DP1A8MWS1 328 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 IGKV1D-33P01593 117 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 IGKV1-33P01594 117 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 ARL6IP6Q8N6S5 226 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 PPP1R3EQ9H7J1 279 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 IGHV3OR16-13A0A075B7E8 117 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 IGHV3-74A0A0B4J1X5 117 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 MOSP00540 346 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 GCGP01275 180 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 MEF2BQ02080 365 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-203ENST00000394872 DRAM1Q8N682 238 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 NPIPB3Q92617 1050 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 C7orf69Q9H7B7 122 aa8.84□□□□□ -0.99
COL4A6-203ENST00000394872 MT-ND6P03923 174 aa8.84□□□□□ -1
COL4A6-203ENST00000394872 COX6CP09669 75 aa8.84□□□□□ -1
COL4A6-203ENST00000394872 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -1
COL4A6-203ENST00000394872 NUTF2P61970 127 aaKnown RBP8.84□□□□□ -1
COL4A6-203ENST00000394872 APCDD1LQ8NCL9 501 aa8.84□□□□□ -1
COL4A6-203ENST00000394872 CHRNA10Q9GZZ6 450 aa8.84□□□□□ -1
COL4A6-203ENST00000394872 ELF5Q9UKW6 265 aaPredicted RBP8.84□□□□□ -1
COL4A6-203ENST00000394872 TGFAP01135 160 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 ZNF250P15622 560 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 DNLZQ5SXM8 178 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 ITLN2Q8WWU7 325 aaPredicted RBP8.83□□□□□ -1
COL4A6-203ENST00000394872 NEU1Q99519 415 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 FOXI3A8MTJ6 420 aaPredicted RBP8.83□□□□□ -1
COL4A6-203ENST00000394872 PPP1R17O96001 155 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 EGR4Q05215 589 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 FAM201AQ5SY85 155 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms