RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TRAT1Q6PIZ9 186 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 HBZP02008 142 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 IRF2P14316 349 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 COL8A2P25067 703 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 HOXA6P31267 233 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 OR8B8Q15620 311 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 Q56UQ5 140 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 DCAF10Q5QP82 559 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 FAM201AQ5SY85 155 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 LURAP1LQ8IV03 231 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 C11orf42Q8N5U0 333 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 TMEM251Q8N6I4 163 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 BLNKQ8WV28 456 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 SF3B5Q9BWJ5 86 aaKnown RBP11.16□□□□□ -0.62
NFKB1-202ENST00000394820 FAM157AC9JC47 383 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 HAND1O96004 215 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 MEOX1P50221 254 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 PTTG1IPP53801 180 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 OR5AU1Q8NGC0 362 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 RNF138Q8WVD3 245 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 FAM173AQ9BQD7 235 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 TTTY12Q9BZ98 90 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 RIMS4Q9H426 269 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-202ENST00000394820 ZNF331Q9NQX6 463 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-202ENST00000394820 SCO2A0A1W2PP80 73 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 REG1BP48304 166 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 PCP4P48539 62 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 STARD4Q96DR4 205 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 S1PR3Q99500 378 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 TRAV24A0A0B4J272 114 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 MT-CO2P00403 227 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 IGKV1-5P01602 117 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 TMEM11P17152 192 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 IL3RAP26951 378 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 ABLIM2Q6H8Q1 611 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 SCCPDHQ8NBX0 429 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 GTF3AQ92664 365 aaKnown RBP11.15□□□□□ -0.62
NFKB1-202ENST00000394820 C10orf35Q96D05 121 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 TMEM30CPA0ZSE6 113 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 CEACAM18A8MTB9 384 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 RRHO14718 337 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 HPRT1P00492 218 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
NFKB1-202ENST00000394820 APOA2P02652 100 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 CD1BP29016 333 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 SERF2P84101 59 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 ZNF726P1Q15940 193 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 CPAMD8Q8IZJ3 1885 aa11.15□□□□□ -0.62
NFKB1-202ENST00000394820 CIB3Q96Q77 187 aaPredicted RBP11.15□□□□□ -0.62
NFKB1-202ENST00000394820 IGKV1D-33P01593 117 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 IGKV1-33P01594 117 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 CRYGSP22914 178 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 ARR3P36575 388 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 JOSD1Q15040 202 aaPredicted RBP11.14□□□□□ -0.63
NFKB1-202ENST00000394820 NMSQ5H8A3 153 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 TEX38Q6PEX7 206 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 H1FXQ92522 213 aaKnown RBP11.14□□□□□ -0.63
NFKB1-202ENST00000394820 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 DIRC3C9JPN6 131 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 SIAH2O43255 324 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 SELLP14151 372 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 ZNF137PP52743 207 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 PAX9P55771 341 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 TMEM56Q96MV1 263 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 EGLN1Q9GZT9 426 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 TMEM56-RWDD3S4R434 201 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 NEURL1O76050 574 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 CD81P60033 236 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 LRRC75BQ2VPJ9 315 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 LRRC29Q8WV35 223 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 NDUFAF3Q9BU61 184 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 QTRT1Q9BXR0 403 aaKnown RBP11.14□□□□□ -0.63
NFKB1-202ENST00000394820 MGAQ8IWI9 3026 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
NFKB1-202ENST00000394820 B4E171 279 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 TSPAN7P41732 249 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 GNG4P50150 75 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 TNFSF10P50591 281 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 RPL39P5Q59GN2 51 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 VPS25Q9BRG1 176 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 MRPL18Q9H0U6 180 aaKnown RBP11.13□□□□□ -0.63
NFKB1-202ENST00000394820 CRYBB3P26998 211 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 PRB3Q04118 309 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-202ENST00000394820 SRSF6Q13247 344 aaKnown RBP11.13□□□□□ -0.63
NFKB1-202ENST00000394820 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 PXMP4Q9Y6I8 212 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 SERF1AO75920 110 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
NFKB1-202ENST00000394820 OR10J1P30954 320 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 RPL30P62888 115 aaKnown RBP11.13□□□□□ -0.63
NFKB1-202ENST00000394820 PQLC2Q6ZP29 291 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 CYP2G1PQ6ZSU1 146 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 TMEM68Q96MH6 324 aa11.13□□□□□ -0.63
NFKB1-202ENST00000394820 ZNF503-AS2A6NEH8 195 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 CTSSP25774 331 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 RPL31P62899 125 aaKnown RBP11.12□□□□□ -0.63
NFKB1-202ENST00000394820 TMEM183BQ1AE95 376 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 CRIP3Q6Q6R5 217 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 OR5P3Q8WZ94 311 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms