RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 NBEAP1P0C6P0 100 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 DIO3P55073 304 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 MP68P56378 58 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 ZNF404Q494X3 552 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 ZNF876PQ49A33 203 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 SPANXN3Q5MJ09 141 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 SPSB3Q6PJ21 355 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 NFE4Q86UQ8 179 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 PLPP5Q8NEB5 264 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 DHCR7Q9UBM7 475 aaKnown RBP2.83□□□□□ -1.96
XRN1-202ENST00000392981 WASHC3Q9Y3C0 194 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 SOX21Q9Y651 276 aaPredicted RBP2.83□□□□□ -1.96
XRN1-202ENST00000392981 WSB1Q9Y6I7 421 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 ARL2-SNX15V9GYD0 113 aa2.83□□□□□ -1.96
XRN1-202ENST00000392981 TEX50A0A1B0GTY4 177 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 A6NIN4 97 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 D6RAR5 112 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 H7BYZ3 331 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 DEGS1O15121 323 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 SNCAP37840 140 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 H2BFSP57053 126 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 BAXQ07812 192 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 HES1Q14469 280 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 CCL15Q16663 113 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 LCE2CQ5TA81 110 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 ZNF774Q6NX45 483 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 SIGLECL1Q8N7X8 197 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 LMX1AQ8TE12 382 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 SLC7A6Q92536 515 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 TBL1YQ9BQ87 522 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 PSMG3Q9BT73 122 aaPredicted RBP2.82□□□□□ -1.96
XRN1-202ENST00000392981 ZNF586Q9NXT0 402 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 CACNG5Q9UF02 275 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 ZNF337Q9Y3M9 751 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 OR2J2O76002 312 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 BPGMP07738 259 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 TIMP3P35625 211 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 KIR2DS2P43631 304 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 OR1E2P47887 323 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 CDK5Q00535 292 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 Q0VFX4 171 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 C2orf66Q6UXQ4 117 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 RNASE7Q9H1E1 156 aaKnown RBP2.82□□□□□ -1.96
XRN1-202ENST00000392981 Q9H3A6 140 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 KCNE3Q9Y6H6 103 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 YLPM1P49750 1951 aaKnown RBP2.82□□□□□ -1.96
XRN1-202ENST00000392981 A0A087WWV3 80 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 SHISA9B4DS77 424 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 UBFD1O14562 309 aaKnown RBP2.82□□□□□ -1.96
XRN1-202ENST00000392981 LCE2BO14633 110 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 TPT1P13693 172 aaKnown RBP2.82□□□□□ -1.96
XRN1-202ENST00000392981 TAS2R20P59543 309 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 DNAJB13P59910 316 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 ZNF585BQ52M93 769 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 FHL5Q5TD97 284 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 BPIFA4PQ86YQ2 179 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 LINC00471Q8N535 108 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 MCEEQ96PE7 176 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 KLK13Q9UKR3 277 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 IGHV3-38A0A0C4DH36 116 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 PLAC8L1A1L4L8 177 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 TCF21O43680 179 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 OR56A5P0C7T3 313 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 SEC11BP0C7V7 166 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 PRSS3P35030 304 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 GUCA2BQ16661 112 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 DLK2Q6UY11 383 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 C6orf223Q8N319 242 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 OR2M7Q8NG81 312 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 SYNPRQ8TBG9 265 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 KCNS1Q96KK3 526 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 TP53RKQ96S44 253 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 ATG5Q9H1Y0 275 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 OR52D1Q9H346 318 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 PRTFDC1Q9NRG1 225 aa2.82□□□□□ -1.96
XRN1-202ENST00000392981 C4AP0C0L4 1744 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 C4BP0C0L5 1744 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 IGLV4-3A0A075B6K6 122 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 TMEM218A2RU14 115 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 M0R143 59 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 FAAHO00519 579 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 PDCD6O75340 191 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 HLA-DRB1P01911 266 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 TMEM267Q0VDI3 215 aaPredicted RBP2.81□□□□□ -1.96
XRN1-202ENST00000392981 FAM19A1Q7Z5A9 133 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 SLC30A7Q8NEW0 376 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 OR52P1PQ8NH57 321 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 MAL2Q969L2 176 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 ABHD14BQ96IU4 210 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 SMIM14Q96QK8 99 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 SFXN3Q9BWM7 321 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 REG4Q9BYZ8 158 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 C20orf27Q9GZN8 174 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 SMPXQ9UHP9 88 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 RGPD3A6NKT7 1758 aaPredicted RBP2.81□□□□□ -1.96
XRN1-202ENST00000392981 RGPD4Q7Z3J3 1758 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 NRXN2Q9P2S2 1712 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 TMEM72A0PK05 275 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 FAM159BA6NKW6 160 aa2.81□□□□□ -1.96
XRN1-202ENST00000392981 NTN3O00634 580 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms