RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 DCUN1D5Q9BTE7 237 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 RNF167Q9H6Y7 350 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 AKIP1Q9NQ31 210 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 GAR1Q9NY12 217 aaKnown RBP12.64□□□□□ -0.39
PTPRK-208ENST00000392449 IZUMO1RA6ND01 250 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 TUSC2O75896 110 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 CLEC2LP0C7M8 214 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 OR9G9P0C7N8 305 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 GALP22466 123 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 CASC10Q5T4H9 136 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 KCTD9Q7L273 389 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 OR51E2Q9H255 320 aa12.63□□□□□ -0.39
PTPRK-208ENST00000392449 BRI3O95415 125 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 CSN3P07498 182 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 PTHLHP12272 177 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 AADACP22760 399 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 FGF9P31371 208 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-208ENST00000392449 RHOGP84095 191 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 RPEL1Q2QD12 228 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 OSR1Q8TAX0 266 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-208ENST00000392449 TM2D3Q9BRN9 247 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 ZMAT4Q9H898 229 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 C19orf73Q9NVV2 129 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 RBMX2Q9Y388 322 aaKnown RBP12.62□□□□□ -0.39
PTPRK-208ENST00000392449 RRP15Q9Y3B9 282 aaKnown RBP12.62□□□□□ -0.39
PTPRK-208ENST00000392449 OR2W1Q9Y3N9 320 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 TENM2Q9NT68 2774 aa12.62□□□□□ -0.39
PTPRK-208ENST00000392449 HMX3A6NHT5 357 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 BMPR1BO00238 502 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 HLA-DQB1P01920 261 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 EDN2P20800 178 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 MXD1Q05195 221 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 EXOSC2Q13868 293 aaKnown RBP12.61□□□□□ -0.39
PTPRK-208ENST00000392449 CDK10Q15131 360 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 SFXN4Q6P4A7 337 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 USMG5Q96IX5 58 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 SPATA2Q9UM82 520 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 RYR2Q92736 4967 aa12.61□□□□□ -0.39
PTPRK-208ENST00000392449 ATP6V1G2O95670 118 aa12.6□□□□□ -0.39
PTPRK-208ENST00000392449 FCER2P06734 321 aa12.6□□□□□ -0.39
PTPRK-208ENST00000392449 SDC2P34741 201 aa12.6□□□□□ -0.39
PTPRK-208ENST00000392449 BRWD1-AS2P59051 145 aa12.6□□□□□ -0.39
PTPRK-208ENST00000392449 GNG2P59768 71 aa12.6□□□□□ -0.39
PTPRK-208ENST00000392449 OR5H6Q8NGV6 325 aa12.6□□□□□ -0.39
PTPRK-208ENST00000392449 THAP7Q9BT49 309 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-208ENST00000392449 TAS2R8Q9NYW2 309 aa12.6□□□□□ -0.39
PTPRK-208ENST00000392449 CSMD3Q7Z407 3707 aa12.6□□□□□ -0.39
PTPRK-208ENST00000392449 E7EUB6 86 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 EIF4EBP1Q13541 118 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-208ENST00000392449 ARL6IP1Q15041 203 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 ADAMTSL5Q6ZMM2 481 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 SGPP2Q8IWX5 399 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 TCTEX1D2Q8WW35 142 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 SLC25A38Q96DW6 304 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 DCSTAMPQ9H295 470 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 RHBDL2Q9NX52 303 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 ANXA10Q9UJ72 324 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 SSR3Q9UNL2 185 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 STARD9Q9P2P6 4700 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 TRBV9A0A0B4J1U6 114 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 A0A1B0GW64 132 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 TEX22C9J3V5 150 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 PPP5D1E7EU14 171 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 MRPS14O60783 128 aaKnown RBP12.59□□□□□ -0.39
PTPRK-208ENST00000392449 OR2J3O76001 311 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 ACTL6BO94805 426 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
PTPRK-208ENST00000392449 MYOD1P15172 320 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 CD36P16671 472 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 ATP5G2Q06055 141 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 ZFAND6Q6FIF0 208 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 CNIH2Q6PI25 160 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 MMD2Q8IY49 270 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 GVQW1Q8N7I0 195 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 SNAPC3Q92966 411 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 PRELID3BQ9Y3B1 194 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 SELENOKQ9Y6D0 94 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 S4R3C0 116 aa12.59□□□□□ -0.39
PTPRK-208ENST00000392449 SACSQ9NZJ4 4579 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 LOC100506127A0A0U1RQW1 187 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 FAM223BA6NKX1 122 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 H0Y980 276 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 TNFSF12O43508 249 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 OR2A4O95047 310 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 IGHV3-23P01764 117 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 IL6RP08887 468 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-208ENST00000392449 CTXN2P0C2S0 81 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 C15orf32Q32M92 178 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 TPRA1Q86W33 373 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 FAM223AQ8IWN6 122 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 TTC9CQ8N5M4 171 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 FCGR1BQ92637 280 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 CITED4Q96RK1 184 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 SPIN2AQ99865 258 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 SPIN2BQ9BPZ2 258 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 CENPOQ9BU64 300 aa12.58□□□□□ -0.4
PTPRK-208ENST00000392449 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
PTPRK-208ENST00000392449 TRAV18A0A075B6X5 111 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms