RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 RAB4BP61018 213 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 TBPL1P62380 186 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 BTN3A2P78410 334 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 TRIP13Q15645 432 aaPredicted RBP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 KCNJ8Q15842 424 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 LPCAT4Q643R3 524 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 SBSNQ6UWP8 590 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 SOSTDC1Q6X4U4 206 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 AAED1Q7RTV5 226 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 SPATA24Q86W54 205 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 OOSP2Q86WS3 158 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 LRRC34Q8IZ02 419 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 OFCC1Q8IZS5 231 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 CLECL1Q8IZS7 167 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 SPICQ8N5J4 248 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 LINC00311Q8N616 119 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 PLPP5Q8NEB5 264 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 PXT1Q8NFP0 134 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 OR4K17Q8NGC6 315 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 OR5K1Q8NHB7 308 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 RORBQ92753 470 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 COPS4Q9BT78 406 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 NT5C3AQ9H0P0 336 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 OR51E2Q9H255 320 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 C8orf33Q9H7E9 229 aaPredicted RBP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 DMAC2Q9NW81 257 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 CD300AQ9UGN4 299 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 LINC00527Q9UJ94 153 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 BAIAP2Q9UQB8 552 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 TIMM22Q9Y584 194 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 V9GYY9 64 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 NUP160Q12769 1436 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 CHD2O14647 1828 aaKnown RBP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 AQRO60306 1485 aaKnown RBP eCLIP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 CHD3Q12873 2000 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 KDM6BO15054 1643 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 DICER1Q9UPY3 1922 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 SCN10AQ9Y5Y9 1956 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 TRAV25A0A0B4J276 109 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 TMEM269A0A1B0GVZ9 245 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 C5orf67F2Z3F1 127 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 GOLGA8TH3BQL2 631 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 MPHOSPH10O00566 681 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 MRASO14807 208 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 CRXO43186 299 aaPredicted RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 REG1AP05451 166 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 MSMBP08118 114 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 FKBP2P26885 142 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 CALRP27797 417 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 RPA3P35244 121 aaPredicted RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 UGT2B10P36537 528 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 HSPA9P38646 679 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 HAAOP46952 286 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 FOXA3P55318 350 aaPredicted RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 C1QTNF8P60827 252 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 CNBPP62633 177 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 HERVK_113P63121 156 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 HMGN5P82970 282 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 TRAM1Q15629 374 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 TEX261Q6UWH6 196 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 ATP5L2Q7Z4Y8 100 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 C1orf174Q8IYL3 243 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 ATOH7Q8N100 152 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 NATD1Q8N6N6 113 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 ZNF676Q8N7Q3 588 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 WFDC11Q8NEX6 87 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 OR5B17Q8NGF7 314 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 DYNC2LI1Q8TCX1 351 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 C12orf43Q96C57 262 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 CERS2Q96G23 380 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 ACY3Q96HD9 319 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 MYCBPQ99417 103 aaPredicted RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 CIB1Q99828 191 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 CCDC77Q9BR77 488 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 SLC50A1Q9BRV3 221 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 AUNIPQ9H7T9 357 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 RASL12Q9NYN1 266 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 MAT2BQ9NZL9 334 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 VAPAQ9P0L0 249 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 CFAP45Q9UL16 551 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 SNX10Q9Y5X0 201 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 KPTNQ9Y664 436 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 U3KQ87 197 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 POLQO75417 2590 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 MUC2Q02817 5179 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 PTPN13Q12923 2485 aa-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 PHRF1Q9P1Y6 1649 aaKnown RBP-0.42□□□□□ -2.48
SNORD28-201ENST00000384706 SPTBP11277 2137 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 HEATR1Q9H583 2144 aaKnown RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 ABCC12Q96J65 1359 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 TENM4Q6N022 2769 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 TRAV1-1A0A0B4J248 108 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 A0A1B0GX12 115 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 BICDL2A1A5D9 508 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 OR6C6A6NF89 314 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 CCDC160A6NGH7 325 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 SMIM9A6NGZ8 99 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 EFCAB9A8MZ26 197 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 ZNF736B4DX44 427 aaPredicted RBP-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms