RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 DCUN1D4Q92564 292 aa19.86■□□□□ 0.77
ECHDC3-201ENST00000379215 HARBI1Q96MB7 349 aa19.86■□□□□ 0.77
ECHDC3-201ENST00000379215 TMEM140Q9NV12 185 aa19.86■□□□□ 0.77
ECHDC3-201ENST00000379215 E5RGE8 158 aa19.85■□□□□ 0.77
ECHDC3-201ENST00000379215 Q6ZRM9 215 aa19.85■□□□□ 0.77
ECHDC3-201ENST00000379215 VSTM2AQ8TAG5 236 aa19.85■□□□□ 0.77
ECHDC3-201ENST00000379215 RNF126Q9BV68 326 aa19.85■□□□□ 0.77
ECHDC3-201ENST00000379215 TNFSF18Q9UNG2 199 aa19.85■□□□□ 0.77
ECHDC3-201ENST00000379215 NSG2Q9Y328 171 aa19.85■□□□□ 0.77
ECHDC3-201ENST00000379215 HSPB11Q9Y547 144 aa19.85■□□□□ 0.77
ECHDC3-201ENST00000379215 APCP25054 2843 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 A0A1W2PPI3 338 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 MED6O75586 246 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 LGALS7P47929 136 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 ZNF345Q14585 488 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 FOXRED2Q8IWF2 684 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 PDZD9Q8IXQ8 264 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 OR4A16Q8NH70 328 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 MALSU1Q96EH3 234 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 RNF5Q99942 180 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 ARHGAP32A7KAX9 2087 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 H0YIZ8 118 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 RBMXL2O75526 392 aaKnown RBP19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 CD1BP29016 333 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 MS4A7Q9GZW8 240 aaPredicted RBP19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 MFFQ9GZY8 342 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 C7orf69Q9H7B7 122 aa19.84■□□□□ 0.77
ECHDC3-201ENST00000379215 POLQO75417 2590 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 L7N2F9 121 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 NPFFO15130 113 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 OR2F2O95006 317 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 RPS16P62249 146 aaKnown RBP19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 OR2F1Q13607 317 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 HABP2Q14520 560 aaPredicted RBP19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 IZUMO4Q1ZYL8 232 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 AARDQ4LEZ3 155 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 CXorf66Q5JRM2 361 aaPredicted RBP19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 OR4A47Q6IF82 309 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 ACOT7LQ6ZUV0 252 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 SSX9Q7RTT3 188 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 OR4A5Q8NH83 315 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 BET1LQ9NYM9 111 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 OR5AC2Q9NZP5 309 aa19.83■□□□□ 0.76
ECHDC3-201ENST00000379215 A0A0D9SG52 128 aa19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 CENPVL3A0A0U1RRI6 287 aa19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 TMEM249Q2WGJ8 235 aa19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 GPR157Q5UAW9 335 aa19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 LHFPL4Q7Z7J7 247 aa19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 RAB40CQ96S21 281 aa19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 HSPB7Q9UBY9 170 aa19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 RCL1Q9Y2P8 373 aaKnown RBP19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 HILPDAQ9Y5L2 63 aa19.82■□□□□ 0.76
ECHDC3-201ENST00000379215 A0A1W2PRD5 423 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 A0A1W2PRF3 423 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 A0A1W2PRM7 423 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 LY86O95711 162 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 VAMP2P63027 116 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 VMA21Q3ZAQ7 101 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 LGALSLQ3ZCW2 172 aaPredicted RBP19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 LDLRAD2Q5SZI1 272 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 LAMTOR1Q6IAA8 161 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 ZNF429Q86V71 674 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 VKORC1L1Q8N0U8 176 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 OR52E5Q8NH55 327 aa19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 TSNAXQ99598 290 aaKnown RBP19.81■□□□□ 0.76
ECHDC3-201ENST00000379215 IGHV1-69DA0A0B4J2H0 117 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 TIMM23O14925 209 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 IGHV1-69P01742 117 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 P2RY1P47900 373 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 POLR2GP62487 172 aaKnown RBP eCLIP19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 TNFRSF9Q07011 255 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 PRNDQ9UKY0 176 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 SYNGR2O43760 224 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 SSSCA1O60232 199 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 GPR137BO60478 399 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 FGF2P09038 288 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 OR9G9P0C7N8 305 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 IGHV4-31P0DP07 118 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 SAA4P35542 130 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 UBE2KP61086 200 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 SSX2Q16385 188 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 AQP10Q96PS8 301 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 FKBP11Q9NYL4 201 aa19.8■□□□□ 0.76
ECHDC3-201ENST00000379215 IGHV3-72A0A0B4J1Y9 119 aa19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 C15orf61A6NNL5 157 aa19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 TGFAP01135 160 aa19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 IL6RP08887 468 aaPredicted RBP19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 SAA1P0DJI8 122 aaPredicted RBP19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 CXCL2P19875 107 aa19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 RELBQ01201 579 aa19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 PUSL1Q8N0Z8 303 aaKnown RBP19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 CFHR4Q92496 578 aa19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 FOXA2Q9Y261 457 aaPredicted RBP19.79■□□□□ 0.76
ECHDC3-201ENST00000379215 ABCA2Q9BZC7 2435 aa19.78■□□□□ 0.76
ECHDC3-201ENST00000379215 TRAV40A0A0B4J280 105 aa19.78■□□□□ 0.76
ECHDC3-201ENST00000379215 SRRM4A7MD48 611 aaKnown RBP19.78■□□□□ 0.76
ECHDC3-201ENST00000379215 UPK2O00526 184 aa19.78■□□□□ 0.76
ECHDC3-201ENST00000379215 SPDEFO95238 335 aa19.78■□□□□ 0.76
ECHDC3-201ENST00000379215 PDLIM3Q53GG5 364 aaPredicted RBP19.78■□□□□ 0.76
ECHDC3-201ENST00000379215 CIB3Q96Q77 187 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms