RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SERPINB10P48595 397 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 PLAC9Q5JTB6 97 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 MS4A15Q8N5U1 240 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 NANOGP1Q8N7R0 232 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 NECAP1Q8NC96 275 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 PSORS1C1Q9UIG5 152 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 FOXI3A8MTJ6 420 aaPredicted RBP13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 TNFAIP8O95379 198 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 CBLN1P23435 193 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 ARL3P36405 182 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 RAB11BQ15907 218 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 OR2B11Q5JQS5 317 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 BTNL8Q6UX41 500 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 CLEC19AQ6UXS0 136 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 LYG2Q86SG7 212 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 FAM89BQ8N5H3 189 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 DHRSXQ8N5I4 330 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 TMEM203Q969S6 136 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 SPIN2AQ99865 258 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 SPIN2BQ9BPZ2 258 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 GINS4Q9BRT9 223 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 MLXQ9UH92 298 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 FBXL7Q9UJT9 491 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 AK6Q9Y3D8 172 aaKnown RBP13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 KMT2AQ03164 3969 aa13.3□□□□□ -0.28
PDLIM4-202ENST00000379018 A0A075B6Q4 140 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 DPPA5A6NC42 116 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 LINC00473A8K010 186 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 GNAO1P09471 354 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 DEFB135Q30KP9 77 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 TTC9CQ8N5M4 171 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 UXS1Q8NBZ7 420 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 GFI1Q99684 422 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 CABLES2Q9BTV7 478 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 NDUFA13Q9P0J0 144 aa13.29□□□□□ -0.28
PDLIM4-202ENST00000379018 HERC2O95714 4834 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 TMEM213A2RRL7 107 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 SLC17A2O00624 439 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 FCGR3AP08637 254 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 DUTP33316 252 aaKnown RBP13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 PLA2G7Q13093 441 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 TPBGQ13641 420 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 TM4SF20Q53R12 229 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 C8orf59Q8N0T1 100 aaPredicted RBP13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 VKORC1L1Q8N0U8 176 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 OR56B1Q8NGI3 324 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 ADTRPQ96IZ2 230 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 FYTTD1Q96QD9 318 aaKnown RBP13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 KLK5Q9Y337 293 aaPredicted RBP13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 DMRT1Q9Y5R6 373 aa13.28□□□□□ -0.28
PDLIM4-202ENST00000379018 TRBV6-7A0A0A0MS04 114 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 LGALS9O00182 355 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 CREBL2O60519 120 aaPredicted RBP13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 FCGR3BO75015 233 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 UCHL1P09936 223 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 CDK10Q15131 360 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 SLC25A42Q86VD7 318 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 MMD2Q8IY49 270 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 OSR1Q8TAX0 266 aaPredicted RBP13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 CCDC140Q96MF4 163 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 MND1Q9BWT6 205 aa13.27□□□□□ -0.29
PDLIM4-202ENST00000379018 SMIM31A0A1B0GVY4 71 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 SPRY2O43597 315 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 NDUFB8O95169 186 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 MED22Q15528 200 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 ANKRD55Q3KP44 614 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 FAM106AQ4KMX7 169 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 FAM209BQ5JX69 171 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 LIPKQ5VXJ0 399 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 RBPMS2Q6ZRY4 209 aaKnown RBP13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 FAM3DQ96BQ1 224 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 ZNF257Q9Y2Q1 563 aa13.26□□□□□ -0.29
PDLIM4-202ENST00000379018 GNB3P16520 340 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 TNFRSF9Q07011 255 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 C2orf76Q3KRA6 126 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 KCTD21Q4G0X4 260 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 HES5Q5TA89 166 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 GPHB5Q86YW7 130 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 OR1L6Q8NGR2 347 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 RAB3CQ96E17 227 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 YTHDF1Q9BYJ9 559 aaKnown RBP13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 MRPS26Q9BYN8 205 aaKnown RBP13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 KCNK7Q9Y2U2 307 aa13.25□□□□□ -0.29
PDLIM4-202ENST00000379018 IGHV3-35A0A0C4DH35 117 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 TMEM272A0A1B0GTI8 110 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 TEX22C9J3V5 150 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 RAB27BO00194 218 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 REG1AP05451 166 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 SMIM18P0DKX4 95 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 BMI1P35226 326 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 RPL27AP46776 148 aaKnown RBP13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 APOC4P55056 127 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 RPS25P62851 125 aaKnown RBP13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 ZNF585BQ52M93 769 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 KCTD9Q7L273 389 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 UFD1Q92890 307 aa13.24□□□□□ -0.29
PDLIM4-202ENST00000379018 EEF1AKMT3Q96AZ1 226 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms