RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 LSM10Q969L4 123 aaKnown RBP10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 ZNF502Q8TBZ5 544 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 C16orf92Q96LL3 132 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 ZG16O60844 167 aa10.27□□□□□ -0.76
PCDHA9-201ENST00000378122 KIAA1644Q3SXP7 199 aa10.27□□□□□ -0.76
PCDHA9-201ENST00000378122 SFRP2Q96HF1 295 aa10.27□□□□□ -0.76
PCDHA9-201ENST00000378122 NUDT16L1Q9BRJ7 211 aaKnown RBP10.27□□□□□ -0.76
PCDHA9-201ENST00000378122 PSMB11A5LHX3 300 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 ZNF735P0CB33 412 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 ZNF714Q96N38 554 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 IGKV1D-42A0A075B6H8 117 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 FGFRL1Q8N441 504 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 CSRP3P50461 194 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 CTAG1AP78358 180 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 IZUMO4Q1ZYL8 232 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 LEPROTL1O95214 131 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 RPS11P62280 158 aaKnown RBP eCLIP10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 HCP5Q6MZN7 132 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 SLC25A33Q9BSK2 321 aa10.27□□□□□ -0.77
PCDHA9-201ENST00000378122 LINC00869P0C866 280 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 SSTR5P35346 364 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 SAP25Q8TEE9 199 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 WFDC12Q8WWY7 111 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 TMEM45BQ96B21 275 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 QTRT1Q9BXR0 403 aaKnown RBP10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 COL25A1Q9BXS0 654 aaPredicted RBP10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 CD8AP01732 235 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 HLA-DQA1P01909 254 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 NUBP1P53384 320 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 C2orf68Q2NKX9 166 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 SLC25A45Q8N413 288 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 SRXN1Q9BYN0 137 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 A8MWL6 223 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM106CPP0CH98 169 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 FOLR2P14207 255 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 CACNG7P62955 275 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM74A4Q5TZK3 123 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 SLC25A34Q6PIV7 304 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 TMEM136Q6ZRR5 245 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 C7orf69Q9H7B7 122 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 ANKRD36A6QL64 1941 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 RPL31P62899 125 aaKnown RBP10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 VKORC1L1Q8N0U8 176 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 IGHV3OR16-8A0A075B7F1 116 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 B4E171 279 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 S1PR2O95136 353 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 TSPAN7P41732 249 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 METTL26Q96S19 204 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 NEU1Q99519 415 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 HIST1H4GQ99525 98 aa10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 CARHSP1Q9Y2V2 147 aaKnown RBP10.26□□□□□ -0.77
PCDHA9-201ENST00000378122 IGKV3D-20A0A0C4DH25 116 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 PGPA6NDG6 321 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 IGHMP01871 453 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 ID1P41134 155 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 ATRAIDQ6UW56 229 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 SHISA3A0PJX4 238 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 C19orf54Q5BKX5 351 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 DLL3Q9NYJ7 618 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 LOC105371242A0A075B767 164 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 TNFRSF9Q07011 255 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 PRSS8Q16651 343 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 COL4A5P29400 1685 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 CKS2P33552 79 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 NPBWR2P48146 333 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 UNC119Q13432 240 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 Q96M66 194 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 A8MXK9 166 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 EBLN2Q6P2I7 272 aa10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 SCARF2Q96GP6 870 aaPredicted RBP10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 C11orf68Q9H3H3 251 aaKnown RBP10.25□□□□□ -0.77
PCDHA9-201ENST00000378122 C17orf51A8MQB3 221 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 MPDU1O75352 247 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 THY1P04216 161 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 RIPPLY3P57055 190 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 TMEM238LA0A1B0GVL6 79 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 A6NJY4 79 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 CRYBB3P26998 211 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 ASPHD2Q6ICH7 369 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 HSPB7Q9UBY9 170 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 ZIC3O60481 467 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 ZNF324O75467 553 aaPredicted RBP10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 ZNF708P17019 499 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 DDB2Q92466 427 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 SGK494Q96LW2 274 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 ERVFRD-1P60508 538 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 MYOFQ9NZM1 2061 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 CALHM1Q8IU99 346 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 THSD7AQ9UPZ6 1657 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 LRRC75BQ2VPJ9 315 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 TMEM177Q53S58 311 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 LINC01590Q5TEZ4 76 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 GCSAMQ8N6F7 178 aa10.24□□□□□ -0.77
PCDHA9-201ENST00000378122 H3BTX0 84 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms