RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CFAP47Q6ZTR5 3102 aa14.99□□□□□ -0.01
GNE-201ENST00000377902 ZNF705FA8MVS1 300 aaPredicted RBP14.99□□□□□ -0.01
GNE-201ENST00000377902 ZNF705DP0CH99 300 aaPredicted RBP14.99□□□□□ -0.01
GNE-201ENST00000377902 ZNF705BP0CI00 300 aaPredicted RBP14.99□□□□□ -0.01
GNE-201ENST00000377902 FOXJ2Q9P0K8 574 aa14.99□□□□□ -0.01
GNE-201ENST00000377902 LYZL6O75951 148 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 HCFC1P51610 2035 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 ERVFC1-1P60608 527 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 PRAMEF6Q5VXH4 476 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 MIC13Q5XKP0 118 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 TP53TG3Q9ULZ0 132 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 WDR83OSQ9Y284 106 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 OOEPA6NGQ2 149 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 SLC17A3O00476 420 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 AQP7O14520 342 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 PDE6DO43924 150 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 CBLN1P23435 193 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 RPL29P47914 159 aaKnown RBP14.98□□□□□ -0.01
GNE-201ENST00000377902 SOX8P57073 446 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 TGFBR3Q03167 851 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 C11orf53Q8IXP5 236 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 ZBTB34Q8NCN2 500 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 OCC1Q8TAD7 63 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 CIB3Q96Q77 187 aaPredicted RBP14.98□□□□□ -0.01
GNE-201ENST00000377902 TBX15Q96SF7 602 aa14.98□□□□□ -0.01
GNE-201ENST00000377902 F6UZH7 168 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 TMPRSS2O15393 492 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 PROP1O75360 226 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 FOXF2Q12947 444 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 HLA-DRB5Q30154 266 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 MEOX1P50221 254 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 C1orf194Q5T5A4 169 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 GCNT2Q8N0V5 402 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 SSMEM1Q8WWF3 244 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 R3HDM4Q96D70 268 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 ZDBF2Q9HCK1 2354 aa14.97□□□□□ -0.01
GNE-201ENST00000377902 TRAV3A0A0B4J244 114 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 C9orf172C9J069 976 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 F2Z2F3 143 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 FCGR3BO75015 233 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 FOXL1Q12952 345 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 TREML4Q6UXN2 200 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 ABHD12Q8N2K0 398 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 DIRC2Q96SL1 478 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 KCNIP2Q9NS61 270 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 LINC00310P59036 64 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 EDDM3AQ14507 147 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 Q8TCH9 128 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 MGST2Q99735 147 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 MS4A5Q9H3V2 200 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 ZDHHC11Q9H8X9 412 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 HES4Q9HCC6 221 aa14.96□□□□□ -0.01
GNE-201ENST00000377902 YTHDF2Q9Y5A9 579 aaKnown RBP14.96□□□□□ -0.01
GNE-201ENST00000377902 TET2Q6N021 2002 aaPredicted RBP14.96□□□□□ -0.01
GNE-201ENST00000377902 MDFIC2A0A1B0GVS7 189 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 KITLGP21583 273 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 SPATA31B1PQ5VZV4 182 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 SLC35E4Q6ICL7 350 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 ZNF705AQ6ZN79 300 aaPredicted RBP14.95□□□□□ -0.02
GNE-201ENST00000377902 Q6ZWC4 215 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 KLF14Q8TD94 323 aaPredicted RBP14.95□□□□□ -0.02
GNE-201ENST00000377902 NANOS1Q8WY41 292 aaKnown RBP14.95□□□□□ -0.02
GNE-201ENST00000377902 PTPRBP23467 1997 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 A6NNC1 897 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 AGFG2O95081 481 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 TRIP6Q15654 476 aaKnown RBP14.95□□□□□ -0.02
GNE-201ENST00000377902 RNFT1Q5M7Z0 435 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 DCAF10Q5QP82 559 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 MSL2Q9HCI7 577 aa14.95□□□□□ -0.02
GNE-201ENST00000377902 SMG1Q96Q15 3661 aaKnown RBP14.95□□□□□ -0.02
GNE-201ENST00000377902 A0A1W2PNU3 283 aaPredicted RBP14.94□□□□□ -0.02
GNE-201ENST00000377902 K7EN84 100 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 M0R143 59 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 FOXH1O75593 365 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 CD99P14209 185 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 CDKN1AP38936 164 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 CMTM2Q8TAZ6 248 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 TAAR6Q96RI8 345 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 SPRR3Q9UBC9 169 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 KIR2DL5BA0A0G2JN68 375 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 KIR2DL5BA0A0G2JPC4 375 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 CER1O95813 267 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 TIMP3P35625 211 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 TDGF1P3P51864 188 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 UTF1Q5T230 341 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 TOMM20LQ6UXN7 152 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 ACP7Q6ZNF0 438 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 KIR2DL5AQ8N109 375 aa14.94□□□□□ -0.02
GNE-201ENST00000377902 HPRT1P00492 218 aa14.93□□□□□ -0.02
GNE-201ENST00000377902 IGHV1-2P23083 117 aa14.93□□□□□ -0.02
GNE-201ENST00000377902 OR10J1P30954 320 aa14.93□□□□□ -0.02
GNE-201ENST00000377902 PDLIM3Q53GG5 364 aaPredicted RBP14.93□□□□□ -0.02
GNE-201ENST00000377902 ZCCHC14Q8WYQ9 949 aaKnown RBP14.93□□□□□ -0.02
GNE-201ENST00000377902 C1orf159Q96HA4 380 aa14.93□□□□□ -0.02
GNE-201ENST00000377902 SEPSECSQ9HD40 501 aaKnown RBP14.93□□□□□ -0.02
GNE-201ENST00000377902 HEYLQ9NQ87 328 aaPredicted RBP14.93□□□□□ -0.02
GNE-201ENST00000377902 IQCF6A8MYZ5 107 aa14.93□□□□□ -0.02
GNE-201ENST00000377902 RPL39P5Q59GN2 51 aa14.93□□□□□ -0.02
GNE-201ENST00000377902 PRAMEF5Q5TYX0 476 aa14.93□□□□□ -0.02
GNE-201ENST00000377902 GGTLC1Q9BX51 225 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms