RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 RPS11P62280 158 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 DPM3Q9P2X0 92 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 A0A0G2JK05 382 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 NPIPB11E5RHQ5 1161 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 KCNAB3O43448 404 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 KLK2P20151 261 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 OR52M1Q8NGK5 317 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 OR4C12Q96R67 309 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 DOCK4Q8N1I0 1966 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 PQLC2LA1A4F0 135 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 IGFBP3P17936 291 aaPredicted RBP15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 FAM106AQ4KMX7 169 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 GBGT1Q8N5D6 347 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 FAM216BQ8N7L0 139 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 F12P00748 615 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 CENPVQ7Z7K6 275 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 OSR1Q8TAX0 266 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 ZSWIM8A7E2V4 1837 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 HIST1H1BP16401 226 aaKnown RBP15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 FXYD3Q14802 87 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 Q1RN00 199 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 IZUMO4Q1ZYL8 232 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 NHLRC3Q5JS37 347 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 NUP37Q8NFH4 326 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 ELOA3CA0A087WX78 387 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 CRISP2P16562 243 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 LAMTOR1Q6IAA8 161 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 RTN4RL2Q86UN3 420 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 FAM168AQ92567 244 aa15.15■□□□□ 0.02
CLSTN1-202ENST00000377298 KBTBD11-OT1A0A1B0GTJ5 212 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 PTTG1IPP53801 180 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 Q5BKY6 102 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 TMEM78Q5T7P6 136 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 OR5AU1Q8NGC0 362 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 IGHV3OR16-10A0A075B7F0 116 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 PF4P02776 101 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 OR5AL1P0C617 328 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 C16orf92Q96LL3 132 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 PLSCR2Q9NRY7 297 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 TIMP3P35625 211 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 NHLH1Q02575 133 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 TBR1Q16650 682 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 PUSL1Q8N0Z8 303 aaKnown RBP15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 VAMP8Q9BV40 100 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 IL36RNQ9UBH0 155 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 ZMAT5Q9UDW3 170 aaKnown RBP15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 ATP5G2Q06055 141 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 FAM201AQ5SY85 155 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 MIC13Q5XKP0 118 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 THADAQ6YHU6 1953 aa15.14■□□□□ 0.01
CLSTN1-202ENST00000377298 ARHGEF17Q96PE2 2063 aaPredicted RBP15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 CCL1P22362 96 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 RNFT1Q5M7Z0 435 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 TEX50A0A1B0GTY4 177 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 H0YL77 283 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 ZNF253O75346 499 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 TOMM20LQ6UXN7 152 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 PRNTQ86SH4 94 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 OR10J6PQ8NGY7 276 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 MS4A10Q96PG2 267 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 DNAJC4Q9NNZ3 241 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 AUP1Q9Y679 476 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 ISLRO14498 428 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 BMPERQ8N8U9 685 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 LINC00312Q9Y6C7 94 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 SIGLEC5O15389 551 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 OR13A1Q8NGR1 328 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 PARD6AQ9NPB6 346 aa15.13■□□□□ 0.01
CLSTN1-202ENST00000377298 RAB9AP51151 201 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 RPL39P5Q59GN2 51 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 TP53RKQ96S44 253 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 C19orf24Q9BVV8 132 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 IL18BPO95998 194 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 G0S2P27469 103 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 H2BFSP57053 126 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 LY6DQ14210 128 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 MRPL54Q6P161 138 aaKnown RBP15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 MST1P26927 711 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 RND3P61587 244 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 VKORC1L1Q8N0U8 176 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 CBLN4Q9NTU7 201 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 CBY1Q9Y3M2 126 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 TMEM56-RWDD3S4R434 201 aa15.12■□□□□ 0.01
CLSTN1-202ENST00000377298 EFNA2O43921 213 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 PMS2P11Q13670 270 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 TM4SF20Q53R12 229 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 GGNQ86UU5 652 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 ZIC4Q8N9L1 334 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 FBLN5Q9UBX5 448 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 ACACAQ13085 2346 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 LCN2P80188 198 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 VWA8A3KMH1 1905 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 RNF151Q2KHN1 245 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 HLA-DRB5Q30154 266 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 OR2D3Q8NGH3 330 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 EAF1Q96JC9 268 aaPredicted RBP15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 CSN3P07498 182 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 C8orf88P0DMB2 117 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 FCGR2BP31994 310 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms