RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 C7orf77A4D0Y5 90 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 M0R3E3 92 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 MFAP2P55001 183 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 UNQ9370/PRO34162Q6UXP9 181 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 IGHV3OR16-13A0A075B7E8 117 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 IGHV3-74A0A0B4J1X5 117 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 H0YL77 283 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 KBTBD11O94819 623 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 LYRM7Q5U5X0 104 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 TAF15Q92804 592 aaKnown RBP eCLIP11.58□□□□□ -0.56
GPC6-201ENST00000377047 A8MWL6 223 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 C1QTNF12Q5T7M4 302 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 PPP1R3EQ9H7J1 279 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 DPM3Q9P2X0 92 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 IGKV1D-43A0A0B4J1Z2 117 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 FAM74A7A6NL05 159 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 MEOX2P50222 304 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 ZNF146Q15072 292 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 ASPHD2Q6ICH7 369 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 ELOVL1Q9BW60 279 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 SEC16AO15027 2179 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 OR4C46A6NHA9 309 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 TSPOP30536 169 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 OR1N2Q8NGR9 330 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 S4R3C0 116 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 IGHV3-66A0A0C4DH42 116 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 C11orf91Q3C1V1 193 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 TET1Q8NFU7 2136 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 CBY3A6NI87 242 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 TCTAP57738 103 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 IBA57Q5T440 356 aaKnown RBP11.57□□□□□ -0.56
GPC6-201ENST00000377047 MIEN1Q9BRT3 115 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 ANOS1P23352 680 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 LHX2P50458 406 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 FBXL15Q9H469 300 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 TRPM7Q96QT4 1865 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 CCDC88CQ9P219 2028 aa11.57□□□□□ -0.56
GPC6-201ENST00000377047 ZNF324O75467 553 aaPredicted RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 NCMAPQ5T1S8 102 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 CBLN2Q8IUK8 224 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 OR51M1Q9H341 326 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 FAM90A26D6RGX4 464 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 MOSP00540 346 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 CFDP00746 253 aaPredicted RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 IL4P05112 153 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 ZNF418Q8TF45 676 aaPredicted RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 NPIPB3Q92617 1050 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 PACRGQ96M98 296 aaPredicted RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 TPRP12270 2363 aaKnown RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 OR4X2Q8NGF9 303 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 TUBD1Q9UJT1 453 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 IGHV3-49A0A0A0MS15 119 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 ZNF207O43670 478 aaKnown RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 HERPUD1Q15011 391 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 CYB561D1Q8N8Q1 229 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 TBX15Q96SF7 602 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 SIPA1L1O43166 1804 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 C17orf100A8MU93 164 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 HIST1H1AQ02539 215 aaPredicted RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 ZFP36L1Q07352 338 aaKnown RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 MRPS18CQ9Y3D5 142 aaKnown RBP11.56□□□□□ -0.56
GPC6-201ENST00000377047 PIKFYVEQ9Y2I7 2098 aa11.56□□□□□ -0.56
GPC6-201ENST00000377047 PSG7Q13046 419 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 OR51G1Q8NGK1 321 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 ZNF502Q8TBZ5 544 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 ARL14EPLP0DKL9 152 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 HKR1P10072 659 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 CKS2P33552 79 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 SGMS2Q8NHU3 365 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 PGLYRP4Q96LB8 373 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 CKAP5Q14008 2032 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 AP4M1O00189 453 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 TM4SF5O14894 197 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 WDR25Q64LD2 544 aaPredicted RBP11.55□□□□□ -0.56
GPC6-201ENST00000377047 PQLC2Q6ZP29 291 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 ZNF837Q96EG3 531 aaPredicted RBP11.55□□□□□ -0.56
GPC6-201ENST00000377047 AICDAQ9GZX7 198 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.55□□□□□ -0.56
GPC6-201ENST00000377047 EFEMP2O95967 443 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 APC2O95996 2303 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 C8orf88P0DMB2 117 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 TBR1Q16650 682 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 C5orf66Q9H5L9 145 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 CBLN4Q9NTU7 201 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 POC1AQ8NBT0 407 aa11.55□□□□□ -0.56
GPC6-201ENST00000377047 ELOA3CA0A087WX78 387 aaPredicted RBP11.54□□□□□ -0.56
GPC6-201ENST00000377047 TMEM14DPA8MWL7 114 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 RTN4RL2Q86UN3 420 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 PRB3Q04118 309 aaPredicted RBP11.54□□□□□ -0.56
GPC6-201ENST00000377047 PPP1R27Q86WC6 154 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 PDCD11Q14690 1871 aaKnown RBP11.54□□□□□ -0.56
GPC6-201ENST00000377047 IGKV3OR2-268A0A0C4DH90 116 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 EIF3GO75821 320 aaKnown RBP eCLIP11.54□□□□□ -0.56
GPC6-201ENST00000377047 NRIP2Q9BQI9 281 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 GREB1LQ9C091 1923 aaPredicted RBP11.54□□□□□ -0.56
GPC6-201ENST00000377047 CD99P14209 185 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 RAB9AP51151 201 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 SGK494Q96LW2 274 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 ANKRD36A6QL64 1941 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms