RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 LFNGQ8NES3 379 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 OR4F17Q8NGA8 305 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 OR51H1Q8NH63 302 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 GRPEL2Q8TAA5 225 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 ABHD5Q8WTS1 349 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 SMIM4Q8WVI0 70 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 FCAMRQ8WWV6 532 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 ARPC1AQ92747 370 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 OR4F4Q96R69 305 aa12.46□□□□□ -0.41
C11orf88-202ENST00000375618 A0A1W2PN81 502 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 ZNF701M0R085 212 aaPredicted RBP12.45□□□□□ -0.42
C11orf88-202ENST00000375618 PGLYRP1O75594 196 aaPredicted RBP12.45□□□□□ -0.42
C11orf88-202ENST00000375618 CD74P04233 296 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 CHRNA7P36544 502 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 IL18Q14116 193 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 VMA21Q3ZAQ7 101 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 C10orf55Q5SWW7 151 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 PYHIN1Q6K0P9 492 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 SPAG16Q8N0X2 631 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 TEX45Q8NA69 505 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 KLHL30-AS1Q8NEE0 82 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 OR4S2Q8NH73 311 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 DUX3Q96PT4 197 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 GON7Q9BXV9 100 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 ZNF430Q9H8G1 570 aaPredicted RBP12.45□□□□□ -0.42
C11orf88-202ENST00000375618 ZFP57Q9NU63 452 aa12.45□□□□□ -0.42
C11orf88-202ENST00000375618 CTDSPLO15194 276 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 RLN1P04808 185 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 ZNF735P0CB33 412 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 PF4V1P10720 104 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 TSPAN5P62079 268 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 PHLDA2Q53GA4 152 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 RNASE10Q5GAN6 216 aaKnown RBP12.44□□□□□ -0.42
C11orf88-202ENST00000375618 CXorf66Q5JRM2 361 aaPredicted RBP12.44□□□□□ -0.42
C11orf88-202ENST00000375618 FAAP20Q6NZ36 180 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 UNQ5815/PRO19632Q6UWF5 114 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 LHFPL1Q86WI0 220 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 C1QL4Q86Z23 238 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 PUSL1Q8N0Z8 303 aaKnown RBP12.44□□□□□ -0.42
C11orf88-202ENST00000375618 TMEM229BQ8NBD8 167 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 MRGPRFQ96AM1 343 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 RSRP1Q9BUV0 290 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 GNB4Q9HAV0 340 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 FOXA2Q9Y261 457 aaPredicted RBP12.44□□□□□ -0.42
C11orf88-202ENST00000375618 V9GYH0 126 aa12.44□□□□□ -0.42
C11orf88-202ENST00000375618 DPPA5A6NC42 116 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 APELAP0DMC3 54 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 MYOD1P15172 320 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 MRPS10P82664 201 aaKnown RBP12.43□□□□□ -0.42
C11orf88-202ENST00000375618 DEFB136Q30KP8 78 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 ACTBL2Q562R1 376 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 SSX9Q7RTT3 188 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 ZNF695Q8IW36 515 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 C15orf40Q8WUR7 153 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
C11orf88-202ENST00000375618 A0A1B0GW64 132 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 NUDT19A8MXV4 375 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 E7EUB6 86 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 G3V4G9 280 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 GPR31O00270 319 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 RBFOX2O43251 390 aaKnown RBP eCLIP12.42□□□□□ -0.42
C11orf88-202ENST00000375618 GSTZ1O43708 216 aaPredicted RBP12.42□□□□□ -0.42
C11orf88-202ENST00000375618 S1PR2O95136 353 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 CNIH1O95406 144 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 RAB3DO95716 219 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 KIR2DS2P43631 304 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 CDX1P47902 265 aaPredicted RBP12.42□□□□□ -0.42
C11orf88-202ENST00000375618 RAB9AP51151 201 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 UCP3P55916 312 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 TNXAQ16473 311 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 ZNF585BQ52M93 769 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 AKIRIN2Q53H80 203 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 LINC00482Q8N8I6 264 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 ZNF491Q8N8L2 437 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 RHOVQ96L33 236 aa12.42□□□□□ -0.42
C11orf88-202ENST00000375618 TRAV3A0A0B4J244 114 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 FABP12A6NFH5 140 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 MSGN1A6NI15 193 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 KBTBD11O94819 623 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 OR2A4O95047 310 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 RPA2P15927 270 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 PI3P19957 117 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 TBPP20226 339 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 TAS2R19P59542 299 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 CATR1Q13166 79 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 ZNF79Q15937 498 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 OR4A47Q6IF82 309 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 MRPL41Q8IXM3 137 aaKnown RBP12.41□□□□□ -0.42
C11orf88-202ENST00000375618 WFDC9Q8NEX5 89 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 OR5T1Q8NG75 326 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 TMEM167AQ8TBQ9 72 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 SRSF12Q8WXF0 261 aaKnown RBP12.41□□□□□ -0.42
C11orf88-202ENST00000375618 MS4A10Q96PG2 267 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 OR5B12Q96R08 314 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 OR2A7Q96R45 310 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 P2RX4Q99571 388 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 TNCP24821 2201 aa12.41□□□□□ -0.42
C11orf88-202ENST00000375618 CGB1A6NKQ9 187 aa12.4□□□□□ -0.42
C11orf88-202ENST00000375618 RBMXL2O75526 392 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms