RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 TBC1D28Q2M2D7 210 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 ZNF766Q5HY98 468 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 TIPARPQ7Z3E1 657 aaKnown RBP17.62■□□□□ 0.41
UPF3A-202ENST00000375299 WDR31Q8NA23 367 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 OCC1Q8TAD7 63 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 MIEN1Q9BRT3 115 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 DLEU1O43261 78 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 GRPP07492 148 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 HNF1AP20823 631 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 CBLN1P23435 193 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 ZXDAP98168 799 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 ZNF90Q03938 601 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 AESQ08117 197 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 CYB5R2Q6BCY4 276 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 OR2J1Q9GZK6 312 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 IL17BQ9UHF5 180 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 DOCK7Q96N67 2140 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 SMPD2O60906 423 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 CXorf1O96002 111 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 OR9G9P0C7N8 305 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 LINC00205P59089 165 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 C3AR1Q16581 482 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 TMEM204Q9BSN7 226 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 TMEM208Q9BTX3 173 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 TTTY12Q9BZ98 90 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 HES4Q9HCC6 221 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 PPP1R14DQ9NXH3 145 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 IL36BQ9NZH7 164 aa17.61■□□□□ 0.41
UPF3A-202ENST00000375299 J3QW42 95 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 IRF2P14316 349 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 CRISP2P16562 243 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 THBS3P49746 956 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 C6orf15Q6UXA7 325 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-202ENST00000375299 MRGPRDQ8TDS7 321 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 GMPPAQ96IJ6 420 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-202ENST00000375299 HSD17B10Q99714 261 aaKnown RBP17.6■□□□□ 0.41
UPF3A-202ENST00000375299 MRPL18Q9H0U6 180 aaKnown RBP17.6■□□□□ 0.41
UPF3A-202ENST00000375299 LOXL2Q9Y4K0 774 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 LAMTOR5O43504 91 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 SERF1AO75920 110 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 SELEP16581 610 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 RANP62826 216 aaKnown RBP17.6■□□□□ 0.41
UPF3A-202ENST00000375299 TMEM183BQ1AE95 376 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 ALKBH6Q3KRA9 238 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 TDRG1Q3Y452 100 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 TREML4Q6UXN2 200 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 VASH2Q86V25 355 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 COQ2Q96H96 371 aa17.6■□□□□ 0.41
UPF3A-202ENST00000375299 GABRA6Q16445 453 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 PDLIM3Q53GG5 364 aaPredicted RBP17.59■□□□□ 0.41
UPF3A-202ENST00000375299 CDX2Q99626 313 aaPredicted RBP17.59■□□□□ 0.41
UPF3A-202ENST00000375299 HSPB9Q9BQS6 159 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 PTPRBP23467 1997 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 A6NNC1 897 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 GABRA2P47869 451 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 RPP30P78346 268 aaKnown RBP17.59■□□□□ 0.41
UPF3A-202ENST00000375299 ZNF718Q3SXZ3 478 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 RBM14Q96PK6 669 aaKnown RBP17.59■□□□□ 0.41
UPF3A-202ENST00000375299 MGST2Q99735 147 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 GGTLC1Q9BX51 225 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 GOLT1BQ9Y3E0 138 aa17.59■□□□□ 0.41
UPF3A-202ENST00000375299 RRHO14718 337 aa17.58■□□□□ 0.41
UPF3A-202ENST00000375299 GAGE1Q13065 139 aa17.58■□□□□ 0.41
UPF3A-202ENST00000375299 TMPRSS7Q7RTY8 843 aa17.58■□□□□ 0.41
UPF3A-202ENST00000375299 LRP11Q86VZ4 500 aa17.58■□□□□ 0.41
UPF3A-202ENST00000375299 TMEM251Q8N6I4 163 aa17.58■□□□□ 0.41
UPF3A-202ENST00000375299 COL27A1Q8IZC6 1860 aaPredicted RBP17.58■□□□□ 0.4
UPF3A-202ENST00000375299 IGHV3-43A0A0B4J1X8 118 aa17.58■□□□□ 0.4
UPF3A-202ENST00000375299 WNT9BO14905 357 aa17.58■□□□□ 0.4
UPF3A-202ENST00000375299 CELA3BP08861 270 aa17.58■□□□□ 0.4
UPF3A-202ENST00000375299 IGHV3-43DP0DP04 118 aa17.58■□□□□ 0.4
UPF3A-202ENST00000375299 CDKN1AP38936 164 aa17.58■□□□□ 0.4
UPF3A-202ENST00000375299 AARDQ4LEZ3 155 aa17.58■□□□□ 0.4
UPF3A-202ENST00000375299 MIC13Q5XKP0 118 aa17.58■□□□□ 0.4
UPF3A-202ENST00000375299 OR5AU1Q8NGC0 362 aa17.58■□□□□ 0.4
UPF3A-202ENST00000375299 YTHDF2Q9Y5A9 579 aaKnown RBP17.58■□□□□ 0.4
UPF3A-202ENST00000375299 SSTR5P35346 364 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 OR1L6Q8NGR2 347 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 VAMP8Q9BV40 100 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 MS4A5Q9H3V2 200 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 PSG11Q9UQ72 335 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 PAM16Q9Y3D7 125 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 IQCF6A8MYZ5 107 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 K7EN84 100 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 ACP1P24666 158 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 PSG7Q13046 419 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 MRPL49Q13405 166 aaKnown RBP17.57■□□□□ 0.4
UPF3A-202ENST00000375299 HLA-DRB5Q30154 266 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 ABHD17BQ5VST6 288 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 FBXW9Q5XUX1 488 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 Q6ZR03 302 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 SLC25A40Q8TBP6 338 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 DCAF16Q9NXF7 216 aa17.57■□□□□ 0.4
UPF3A-202ENST00000375299 SLC17A3O00476 420 aa17.56■□□□□ 0.4
UPF3A-202ENST00000375299 LGALS4P56470 323 aa17.56■□□□□ 0.4
UPF3A-202ENST00000375299 TGFBR3Q03167 851 aa17.56■□□□□ 0.4
UPF3A-202ENST00000375299 VN1R17PQ8TDU5 208 aa17.56■□□□□ 0.4
UPF3A-202ENST00000375299 PRSS46E5RG02 174 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 AQP7O14520 342 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 CRYABP02511 175 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms