RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PRR30Q53SZ7 412 aaPredicted RBP15.45■□□□□ 0.06
USP49-202ENST00000373010 DDB2Q92466 427 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 NPCDR1Q9BY65 106 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 NCOR1P1Q9H4R4 102 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 SAA2-SAA4A0A096LPE2 208 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 THBDP07204 575 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 SAA2P0DJI9 122 aaPredicted RBP15.45■□□□□ 0.06
USP49-202ENST00000373010 ERVK-16P61578 105 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 GNB2P62879 340 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 FFAR4Q5NUL3 377 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 ZNF788Q6ZQV5 615 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 SPACA3Q8IXA5 215 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 OR10G4Q8NGN3 311 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 CA5BP1Q8WTZ4 195 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 FAM216AQ8WUB2 273 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 TMPRSS5Q9H3S3 457 aa15.45■□□□□ 0.06
USP49-202ENST00000373010 RBFOX2O43251 390 aaKnown RBP eCLIP15.44■□□□□ 0.06
USP49-202ENST00000373010 MMP23AO75900 390 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 RAB7AP51149 207 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 RELBQ01201 579 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 TLE1Q04724 770 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 BSPH1Q075Z2 132 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 VWC2Q2TAL6 325 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 AARDQ4LEZ3 155 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 LINC00518Q8N0U6 118 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 YPEL4Q96NS1 127 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 TMEM140Q9NV12 185 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 OR4A8P0C604 315 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 NQO2P16083 231 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 GNG10P50151 68 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 ADIPOQQ15848 244 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 ADAM5Q6NVV9 412 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 OR10G9Q8NGN4 311 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 OR10G7Q8NGN6 311 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 ELOVL5Q9NYP7 299 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 DCHS1Q96JQ0 3298 aa15.44■□□□□ 0.06
USP49-202ENST00000373010 DEFA4P12838 97 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 IRF2P14316 349 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 AGAP20933 346 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 SPCS3P61009 180 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 LYG1Q8N1E2 194 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 ZNF251Q9BRH9 671 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 FAM90A9PA6NNJ1 464 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 IFNA10P01566 189 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 SNRPEP62304 92 aaKnown RBP15.43■□□□□ 0.06
USP49-202ENST00000373010 TBR1Q16650 682 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 SLC35E3Q7Z769 313 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 VAX2Q9UIW0 290 aa15.43■□□□□ 0.06
USP49-202ENST00000373010 SMG1Q96Q15 3661 aaKnown RBP15.42■□□□□ 0.06
USP49-202ENST00000373010 ITGB1BP1O14713 200 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 MDKP21741 143 aaPredicted RBP15.42■□□□□ 0.06
USP49-202ENST00000373010 HOXA1P49639 335 aaPredicted RBP15.42■□□□□ 0.06
USP49-202ENST00000373010 ERVFRD-1P60508 538 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 MRPS11P82912 194 aaKnown RBP15.42■□□□□ 0.06
USP49-202ENST00000373010 ZNF343Q6P1L6 599 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 ZNF439Q8NDP4 499 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 OR4S2Q8NH73 311 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 HEYLQ9NQ87 328 aaPredicted RBP15.42■□□□□ 0.06
USP49-202ENST00000373010 IDI2-AS1Q9NZ38 188 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 RRHO14718 337 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 KIR2DS2P43631 304 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 VDAC2P45880 294 aaPredicted RBP15.42■□□□□ 0.06
USP49-202ENST00000373010 ZNF709Q8N972 641 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 ZNF383Q8NA42 475 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 RAB9BQ9NP90 201 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 GAB2Q9UQC2 676 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 SSUH2Q9Y2M2 353 aa15.42■□□□□ 0.06
USP49-202ENST00000373010 CEP295Q9C0D2 2601 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 CTXND1A0A1B0GTU2 59 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 TEX36Q5VZQ5 186 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 ZNRD1Q9P1U0 126 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 A0A087WWC5 75 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 C17orf100A8MU93 164 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 TMPRSS2O15393 492 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 IFNA1P01562 189 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 NDUFB7P17568 137 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 MAS1LP35410 378 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 ABHD12Q8N2K0 398 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 GATAD1Q8WUU5 269 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 SCNM1Q9BWG6 230 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 JKAMPQ9P055 326 aa15.41■□□□□ 0.06
USP49-202ENST00000373010 MBP02144 154 aa15.4■□□□□ 0.06
USP49-202ENST00000373010 CD1BP29016 333 aa15.4■□□□□ 0.06
USP49-202ENST00000373010 Q8N7P7 452 aa15.4■□□□□ 0.06
USP49-202ENST00000373010 P2RX4Q99571 388 aa15.4■□□□□ 0.06
USP49-202ENST00000373010 TCF19Q9Y242 345 aa15.4■□□□□ 0.06
USP49-202ENST00000373010 ZNF835Q9Y2P0 537 aa15.4■□□□□ 0.06
USP49-202ENST00000373010 URGCP-MRPS24S4R325 110 aa15.4■□□□□ 0.06
USP49-202ENST00000373010 SMCO3A2RU48 225 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 ZNF729A6NN14 1252 aaPredicted RBP15.39■□□□□ 0.05
USP49-202ENST00000373010 CD81P60033 236 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 HEPN1Q6WQI6 88 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.39■□□□□ 0.05
USP49-202ENST00000373010 OR52E5Q8NH55 327 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 RAB24Q969Q5 203 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 RHOVQ96L33 236 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 ACTR3CQ9C0K3 210 aaPredicted RBP15.39■□□□□ 0.05
USP49-202ENST00000373010 WDR83OSQ9Y284 106 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 GFRA3O60609 400 aa15.39■□□□□ 0.05
USP49-202ENST00000373010 TNFRSF1AP19438 455 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms