RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 ZNF729A6NN14 1252 aaPredicted RBP8.5□□□□□ -1.05
TRERF1-204ENST00000372922 NANOS3P60323 173 aaKnown RBP8.5□□□□□ -1.05
TRERF1-204ENST00000372922 COL25A1Q9BXS0 654 aaPredicted RBP8.5□□□□□ -1.05
TRERF1-204ENST00000372922 SNRPCP09234 159 aaKnown RBP8.49□□□□□ -1.05
TRERF1-204ENST00000372922 JPT1Q9UK76 154 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 ZNFX1Q9P2E3 1918 aaKnown RBP8.49□□□□□ -1.05
TRERF1-204ENST00000372922 LOC101059948A0A1B0GTJ6 334 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 KCNAB3O43448 404 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 PTGDSP41222 190 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 ZNF345Q14585 488 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 C1QTNF9BB2RNN3 333 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 PCOLCEQ15113 449 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 NEU1Q99519 415 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 QTRT1Q9BXR0 403 aaKnown RBP8.49□□□□□ -1.05
TRERF1-204ENST00000372922 SMDT1Q9H4I9 107 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 KIF13BQ9NQT8 1826 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 COL24A1Q17RW2 1714 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 THY1P04216 161 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 CKS2P33552 79 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 TMEM222Q9H0R3 208 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 GTSF1LQ9H1H1 148 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 TUBA4BQ9H853 241 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 DLL3Q9NYJ7 618 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 CHD5Q8TDI0 1954 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 EPOPA6NHQ4 379 aa8.49□□□□□ -1.05
TRERF1-204ENST00000372922 C17orf51A8MQB3 221 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 NPIPB11E5RHQ5 1161 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 CXCL3P19876 107 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 MFAP2P55001 183 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 CX3CL1P78423 397 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 PRSS8Q16651 343 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 FBLN7Q53RD9 439 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 ZFAND6Q6FIF0 208 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 SLC25A34Q6PIV7 304 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 ALX4Q9H161 411 aaPredicted RBP8.48□□□□□ -1.05
TRERF1-204ENST00000372922 TRAV21A0A0B4J279 112 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 NPPCP23582 126 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 TNFSF10P50591 281 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 GZMMP51124 257 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 S100A7L2Q5SY68 101 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 ATP1A1-AS1Q5TC04 95 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 ST6GAL2Q96JF0 529 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 SPCS1Q9Y6A9 102 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 ZNF883P0CG24 379 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 MESP2Q0VG99 397 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 SNAI3Q3KNW1 292 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 LSM10Q969L4 123 aaKnown RBP8.48□□□□□ -1.05
TRERF1-204ENST00000372922 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 SRXN1Q9BYN0 137 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 ELF5Q9UKW6 265 aaPredicted RBP8.48□□□□□ -1.05
TRERF1-204ENST00000372922 MAP1BP46821 2468 aaKnown RBP8.48□□□□□ -1.05
TRERF1-204ENST00000372922 PGPA6NDG6 321 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 CEACAM1P13688 526 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 TMEM183AQ8IXX5 376 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 OR11H7Q8NGC8 314 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 LINC01560Q8TB33 94 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 CASP8AP2Q9UKL3 1982 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 GPX1P07203 203 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 LIMS1P48059 325 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 RND2P52198 227 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 HSPE1P61604 102 aaKnown RBP8.48□□□□□ -1.05
TRERF1-204ENST00000372922 TLNRD1Q9H1K6 362 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 A0A1W2PQM1 296 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 FAM90A26D6RGX4 464 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 PGLYRP1O75594 196 aaPredicted RBP8.48□□□□□ -1.05
TRERF1-204ENST00000372922 KBTBD11O94819 623 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 BCL2P10415 239 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 ANOS1P23352 680 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 PNKDQ8N490 385 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 FDCSPQ8NFU4 85 aa8.48□□□□□ -1.05
TRERF1-204ENST00000372922 NEU4Q8WWR8 484 aaPredicted RBP8.48□□□□□ -1.05
TRERF1-204ENST00000372922 TDRD6O60522 2096 aaKnown RBP8.48□□□□□ -1.05
TRERF1-204ENST00000372922 GDF9O60383 454 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 PQLC2Q6ZP29 291 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 GP6Q9HCN6 339 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 C7orf71A4D174 169 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 LINC00862A6NCI5 91 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 SSTR5P35346 364 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 EIF4EBP2Q13542 120 aaPredicted RBP8.47□□□□□ -1.05
TRERF1-204ENST00000372922 IBA57Q5T440 356 aaKnown RBP8.47□□□□□ -1.05
TRERF1-204ENST00000372922 OR10S1Q8NGN2 331 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 SSBP4Q9BWG4 385 aaPredicted RBP8.47□□□□□ -1.05
TRERF1-204ENST00000372922 WNT10AQ9GZT5 417 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 J3QW42 95 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 NUTF2P61970 127 aaKnown RBP8.47□□□□□ -1.05
TRERF1-204ENST00000372922 FXYD3Q14802 87 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 TIMM23BQ5SRD1 257 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 C1orf122Q6ZSJ8 110 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 TRBV5-5A0A0J9YX44 114 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 IGHV4-39P01824 125 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
TRERF1-204ENST00000372922 Q6ZT83 130 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 FGFRL1Q8N441 504 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 C9orf62Q8N4C0 152 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 C1orf43Q9BWL3 253 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 TRAV8-4A0A0B4J246 113 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 RTN4RQ9BZR6 473 aa8.47□□□□□ -1.05
TRERF1-204ENST00000372922 TMEM74BQ9NUR3 256 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms