RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 RBMXL1Q96E39 390 aaKnown RBP12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 COMMD9Q9P000 198 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 METTL1Q9UBP6 276 aaKnown RBP12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 CLPSL1A2RUU4 121 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 H0Y980 276 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 KCNAB3O43448 404 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 HLA-DRB1P01911 266 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 S100A1P23297 94 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 COMPP49747 757 aaPredicted RBP12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 ARSJQ5FYB0 599 aaPredicted RBP12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 TEX45Q8NA69 505 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 LINC01006Q8NI28 216 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 VSIG4Q9Y279 399 aa12.33□□□□□ -0.44
PRPF38B-202ENST00000370022 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 SRRM4A7MD48 611 aaKnown RBP12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 SLC25A17O43808 307 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 CREBL2O60519 120 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 NDUFB6O95139 128 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 IGHG2P01859 326 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 RPA2P15927 270 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 NQO2P16083 231 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 ASAH1Q13510 395 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 C9orf152Q5JTZ5 239 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 SIGLEC9Q9Y336 463 aa12.32□□□□□ -0.44
PRPF38B-202ENST00000370022 TEX13DA0A0J9YY54 714 aaPredicted RBP12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 CRYM-AS1A6NIL9 109 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 SERPINE2P07093 398 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 CRYGBP07316 175 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 VSIG10L2P0DP72 767 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 BTCP35070 178 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 CCR6P51684 374 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 POU2AF1Q16633 256 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 MZT2BQ6NZ67 158 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 PPP1R27Q86WC6 154 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 SGPP2Q8IWX5 399 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 TAF15Q92804 592 aaKnown RBP eCLIP12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 RHOVQ96L33 236 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 NAA60Q9H7X0 242 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 KCNIP3Q9Y2W7 256 aa12.31□□□□□ -0.44
PRPF38B-202ENST00000370022 SH2D7A6NKC9 451 aaPredicted RBP12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 OR2A4O95047 310 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 SAA1P0DJI8 122 aaPredicted RBP12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 MDKP21741 143 aaPredicted RBP12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 SLC6A1P30531 599 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 LPAR6P43657 344 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 DCTN2Q13561 401 aaKnown RBP12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 ZNF585BQ52M93 769 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 Q6ZS46 218 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 CADM3Q8N126 398 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 OR2A7Q96R45 310 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 TBC1D24Q9ULP9 559 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 ATG12O94817 140 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 S1PR2O95136 353 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 DEFA1P59665 94 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 DEFA3P59666 94 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 ERVK-16P61578 105 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 DHODHQ02127 395 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 AWAT1Q58HT5 328 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 TMEM128Q5BJH2 165 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 ZNF562Q6V9R5 426 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 TMED4Q7Z7H5 227 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 PUSL1Q8N0Z8 303 aaKnown RBP12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 CENPSQ8N2Z9 138 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 TMEM230Q96A57 120 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 GALNT14Q96FL9 552 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 TP53RKQ96S44 253 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 SERTAD4Q9NUC0 356 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 BET1LQ9NYM9 111 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 ZNF580Q9UK33 172 aa12.3□□□□□ -0.44
PRPF38B-202ENST00000370022 IGHV7-81A0A0B4J1V7 117 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 MARCH11A6NNE9 402 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 AP4M1O00189 453 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 KBTBD11O94819 623 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 FGF2P09038 288 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 ANXA3P12429 323 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 AKR1C4P17516 323 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 UCP1P25874 307 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 UBE2MP61081 183 aaKnown RBP12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 IFITM3Q01628 133 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 ADAD2Q8NCV1 583 aaKnown RBP12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 R3HDM4Q96D70 268 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 HSPB9Q9BQS6 159 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 GON7Q9BXV9 100 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 TMEM222Q9H0R3 208 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 OR51J1Q9H342 316 aa12.29□□□□□ -0.44
PRPF38B-202ENST00000370022 ATRQ13535 2644 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 PIGBOS1A0A0B4J2F0 54 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 CA2P00918 260 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 IGF1P05019 195 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 OR5AC1P0C628 307 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 PROK1P58294 105 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 CX3CL1P78423 397 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 PRSS8Q16651 343 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 TRIM16LQ309B1 348 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms