RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 OR51I2Q9H344 312 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 MBNL3Q9NUK0 354 aaKnown RBP9.65□□□□□ -0.86
USF1-201ENST00000368019 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 TRAV24A0A0B4J272 114 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 ANKRD30BLA7E2S9 258 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 J3QT63 122 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 TMPRSS2O15393 492 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 P0C879 139 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 GFRA1P56159 465 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 COL10A1Q03692 680 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 IQCJQ1A5X6 159 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 ZNF585BQ52M93 769 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 Q6P435 159 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 Q6ZRM9 215 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 RAB1CQ92928 201 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 NEIL1Q96FI4 390 aaPredicted RBP9.64□□□□□ -0.87
USF1-201ENST00000368019 RBKSQ9H477 322 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 VSIRQ9H7M9 311 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 OR6C3Q9NZP0 311 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 LAMP3Q9UQV4 416 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 WIPI2Q9Y4P8 454 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 ARID1AO14497 2285 aa9.64□□□□□ -0.87
USF1-201ENST00000368019 A0A1B0GV90 55 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 F6UZH7 168 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 MRPL33O75394 65 aaKnown RBP9.63□□□□□ -0.87
USF1-201ENST00000368019 SYNGR4O95473 234 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 IGLV2-14P01704 120 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 PATE4P0C8F1 98 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 RD3LP0DJH9 198 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 COX5AP20674 150 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 BMP5P22003 454 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 GDF1P27539 372 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 GPM6AP51674 278 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 ARF1P84077 181 aaKnown RBP9.63□□□□□ -0.87
USF1-201ENST00000368019 ADIRFQ15847 76 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 SSX2Q16385 188 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 YRDCQ86U90 279 aaKnown RBP9.63□□□□□ -0.87
USF1-201ENST00000368019 RPP25LQ8N5L8 163 aaKnown RBP9.63□□□□□ -0.87
USF1-201ENST00000368019 WDR31Q8NA23 367 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 OR2T10Q8NGZ9 312 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 OR51H1Q8NH63 302 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 MEGF10Q96KG7 1140 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 POM121L2Q96KW2 1035 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 PARLQ9H300 379 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 GSX1Q9H4S2 264 aaPredicted RBP9.63□□□□□ -0.87
USF1-201ENST00000368019 JKAMPQ9P055 326 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 ZANQ9Y493 2812 aa9.63□□□□□ -0.87
USF1-201ENST00000368019 XKRY2A2RUG3 117 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 MBD3L4A6NDZ8 208 aaPredicted RBP9.62□□□□□ -0.87
USF1-201ENST00000368019 MBD3L3A6NE82 208 aaPredicted RBP9.62□□□□□ -0.87
USF1-201ENST00000368019 MBD3L5A6NJ08 208 aaPredicted RBP9.62□□□□□ -0.87
USF1-201ENST00000368019 PMS2P5A8MQ11 134 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 H3BP45 60 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 RAB29O14966 203 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 MLNRO43193 412 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 SYNGR1O43759 233 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 MDKP21741 143 aaPredicted RBP9.62□□□□□ -0.87
USF1-201ENST00000368019 PLP2Q04941 152 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 TNFRSF9Q07011 255 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 CATR1Q13166 79 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 PDZD11Q5EBL8 140 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 ZNF497Q6ZNH5 498 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 MBD3L2Q8NHZ7 208 aaPredicted RBP9.62□□□□□ -0.87
USF1-201ENST00000368019 WDYHV1Q96HA8 205 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 GMPPAQ96IJ6 420 aaPredicted RBP9.62□□□□□ -0.87
USF1-201ENST00000368019 RHOVQ96L33 236 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 KCNIP1Q9NZI2 227 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 GAB2Q9UQC2 676 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 POLDIP2Q9Y2S7 368 aa9.62□□□□□ -0.87
USF1-201ENST00000368019 FN1P02751 2386 aaKnown RBP9.61□□□□□ -0.87
USF1-201ENST00000368019 KIR2DL5BA0A0G2JN68 375 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 KIR2DL5BA0A0G2JPC4 375 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 UBE2L5PA0A1B0GUS4 154 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 TNFSF12O43508 249 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 PDE6DO43924 150 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 IL18BPO95998 194 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 GYPAP02724 150 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 IAPPP10997 89 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 FGF8P55075 233 aaPredicted RBP9.61□□□□□ -0.87
USF1-201ENST00000368019 PRSS12P56730 875 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 ERVK11-1P61568 191 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 GNB2P62879 340 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 FOXL1Q12952 345 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 ACSM6Q6P461 480 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 BTNL3Q6UXE8 466 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 ZNF66Q6ZN08 573 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 TMEM144Q7Z5S9 345 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 KIR2DL5AQ8N109 375 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 ZNF664Q8N3J9 261 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.61□□□□□ -0.87
USF1-201ENST00000368019 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
USF1-201ENST00000368019 FAM90A9PA6NNJ1 464 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 TRAPPC6AO75865 159 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 NXPH3O95157 252 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 GOSR1O95249 250 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 IGKV1D-33P01593 117 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms